| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3220 |
|---|
| Symbol | |
|---|
| ID | 3691361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 3531757 |
|---|
| End bp | 3532737 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637729675 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_334592 |
|---|
| Protein GI | 76811870 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000114793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA TCCAGACCAT GCGTGTCTTC GTATGTGTTG CCGAACTGCA GAGCTTCCGC
CGGGCGGCGC GGAAACTCGG CGTATCGAAT GCGCTCGTCA CGCGTTCGAT CGCGATGCTC
GAAACACATC TGAACACGCG TCTCATCCAT CGTACGACAC GCAATCTGTC GCTGACGGAA
GCGGGCATCC GCTATCTCGA CGGCTGCAGG GCGCTCCTCG AGGAGTTCGA TCAGCTCGAG
GCGTCCGTCG AGCGGGCGGT GCACGAGCCC GTCGGCACAT TGCGCGTGGC CGTGTCCGGG
TTGCTGTCGC CCGGCCGGAT CACCCCGCTC GTCGACAGCT ACCGGCGCCA GTACCCGAAG
GTGCGCGTGC AACTGACGCT CACCGAGGGC GCGCTCGACG TGATCGAAGC CGGCTACGAC
GCGGGCCTCG TCACGGGCGG CCGCCTCGAC GGCAACCCGG CGCTGATCGG CCATCCGCTG
ATGCCGAACA CGCTCGCGCT CTGCGCGGCG CCTTCGTACA TCGAGCGGCA CGGCGCGCCG
CACCGCCCCG ACGATCTGGT CCGCCACGCG TGCATCGCGC TGCCGGCCGA CCAGCATGCG
TCGACCTGGC GCTTCGTCGA TCCGGACCAC TTCACGCATG TCGTCTCGCT GCAGCCCGTC
TACACGGTCA ACAGCGCTTC GATGGTGCGC GCGGCGACGC TCGCCGGCAC CGGCATTTCG
GTGCTGCCGG AGAGCTACAT CGCCGATGCG CTCGAAAGCG GCGAGCTCGT GCGGATCCTC
GGCGACTACC GGATCGACGA TCCCGACACG CAGTTGTCGA TCGTCTATCC GAACCGCCAG
TTCCTGCCGG CGCGCACCCG CAGCTTCGTC GAGCACGCGC TGTATCACCT CGGCGGGCAG
AAGACCGAGA CGAACGGCCA CTACTTCATG CGCGAAGCCG GCACGGCGAA GCGCCCGGAC
GTCGTCACCG GGCTCCAGTG A
|
|---|
| Protein sequence | MNQIQTMRVF VCVAELQSFR RAARKLGVSN ALVTRSIAML ETHLNTRLIH RTTRNLSLTE
AGIRYLDGCR ALLEEFDQLE ASVERAVHEP VGTLRVAVSG LLSPGRITPL VDSYRRQYPK
VRVQLTLTEG ALDVIEAGYD AGLVTGGRLD GNPALIGHPL MPNTLALCAA PSYIERHGAP
HRPDDLVRHA CIALPADQHA STWRFVDPDH FTHVVSLQPV YTVNSASMVR AATLAGTGIS
VLPESYIADA LESGELVRIL GDYRIDDPDT QLSIVYPNRQ FLPARTRSFV EHALYHLGGQ
KTETNGHYFM REAGTAKRPD VVTGLQ
|
|---|
| |