Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3216 |
Symbol | |
ID | 3691673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3525912 |
End bp | 3527135 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637729671 |
Product | major facilitator superfamily transporter |
Protein accession | YP_334588 |
Protein GI | 76809208 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0335223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCCG ATTCAGCCGA TTCCGTCCCG TCCCCCCGCA GCGCGTTCGC GACGACGCTG CAGATCGTCT CCGTCGTGTC GTTCACGTTC ATCTGCTATC TGACGATCGG CCTGCCGCTC GCGGTGCTGC CGGGTTTCGT TCATGACGAG CTCGGCTTTT CGGCGATCGT CGCGGGCGCG GCAATCAGCG TCCAGTACTT CGCGACGCTC GCGTCGCGGC CGCTCGCGGG CCGCTGCGCG GACACGCTCG GCCCGAAGCG CACCGTGCTG CGCGGGCTCG CCGCGTGCGG CGCGAGCGGC GCGCTCTTGC TGTCCGCGTT CGCGTTCGCG CGCTGGCCGG CCGCGAGCAT CGGGCTGCTG GTCGCGAGCC GGCTCGTGCT CGGCATCGGC GAGAGCCTCG TCGGCACGGG CGCGATCCTA TGGGGAATCG GCCGCGTCGG CACCGCGCAC AACGCGCGCG TGATTTCGTG GAACGGCATC GCGACGTACG GCGCGCTCGC GATCGGCGCG CCCGTCGGCG TCGCGATCTC GCACGCGCTG ATCCCCGCCG TGCTCGGCAT GCTCGTGATC GCGCTCGCCG CGCTCGGCTA CTATCTCGCA CGGCTGATCA CGCCCGTGCC GCTCGTGCAC GGCGAGCGGA TGTCGTACGC GAGCGTGCTC ACCCGCGTGC TGCCGCACGG CCTCGGCCTC GCGCTCGGCT CGGCCGGTTT CGGCTCGATC GCGACGTTCA TCACGCTCTA CTACGCGGCG CGGCACTGGC CGAACGCCGC GCTGTCGCTG ACCGTGTTCG GCACGCTGTT CATCGGCGCG CGCCTGTTGT TCGCGAACAC GATCAAGACG CACGGCGGGT TCCGCGTCGC GATCGTGTCG TTCGCGTTCG AATGCGCGGG CCTCCTGATG CTGTGGCTCG CACCCGTGCC GCACGTCGCG CTCGTCGGCG CCGCGTTGAC GGGCTTCGGC TTCGCGCTGA TCTTCCCCGC GCTCGGCGTC GAGGCGGTCG CGCTCGTGCC GCCCGCGAGC CGCGGCGCGG CGCTGTCCGC GTATTCGGTG TTCCTCGATC TGTCGCTCGG CATCACGGGG CCGCTCGCCG GTTATGTCGC GGGCGCATTC GGCTATCCGC AGGTGTTCCT GTGCGCGGCC GTGGCGGCGG CGGCGGGCGT CGCGCTATCG ACGGTGCTGT ATCAGCGGCA GGCGCGCCTG TCCGGCAGCG GCGCGGCCGC CTGA
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Protein sequence | MSADSADSVP SPRSAFATTL QIVSVVSFTF ICYLTIGLPL AVLPGFVHDE LGFSAIVAGA AISVQYFATL ASRPLAGRCA DTLGPKRTVL RGLAACGASG ALLLSAFAFA RWPAASIGLL VASRLVLGIG ESLVGTGAIL WGIGRVGTAH NARVISWNGI ATYGALAIGA PVGVAISHAL IPAVLGMLVI ALAALGYYLA RLITPVPLVH GERMSYASVL TRVLPHGLGL ALGSAGFGSI ATFITLYYAA RHWPNAALSL TVFGTLFIGA RLLFANTIKT HGGFRVAIVS FAFECAGLLM LWLAPVPHVA LVGAALTGFG FALIFPALGV EAVALVPPAS RGAALSAYSV FLDLSLGITG PLAGYVAGAF GYPQVFLCAA VAAAAGVALS TVLYQRQARL SGSGAAA
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