| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3209 |
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| Symbol | |
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| ID | 3690681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3517207 |
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| End bp | 3519669 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637729664 |
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| Product | TonB-dependent siderophore receptor family protein |
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| Protein accession | YP_334581 |
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| Protein GI | 76810216 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCGG GCCCCGGGTC TCGCGTGCCG ATGATCGGCG TTCGGCCGCG CGCGATGTCA
TCGAGGTTGC GGGAGTCGAC GAGCAGTGAA CAGAGCGAAG CGGGCGGGAA ACGTTCGGAG
CCACGCGGCG CCGACGACAG TGGAGCGTGC GGCGTGCGCT CGGGCGTGGG CGGTGGACGA
GGCGATCCGC CGATGAGCCG GGCGCCGCAT GCACCGTCGC GCCGTCGCGC GTTCGGGCGC
GGGTTCGCGG CGGCTGCTCG CGCCGCTCAC GGCGCGCCTG TCGCGCATGG CGCGCACGCG
TGCTTCGCCG CCGCGTCGCG TCGCGCGACG GCCGTCGAGC GCTGCGTCAC CGCGCTCGCG
TGCGCGGTGA CGGCGTCCGG CGCGCTCGCC GCCGAGGCGG AACCGGCCGA CGCCGCGCGC
GGCCCGCATC GCGAACTGCC GACCGTGCGC GTGACGAGCG ACGGGGCGCA CGCGTCGCCG
CTGTCCACGC CGCTCGCGGC CGGCTCGCGC CTGAAGCTCG CGAGCCTCGA CACGCCCGCG
AGCGTCGAGG CGATCACCTC CGCGCAGATC GCCGCGCGCG GCGATCGCAC GATCGTCGAC
GCCGTCACGC GCGCGACGGG CTTCAGCACG GCCGCGGCGC CCGGCAACGG CGGCACGGCG
CTCAGCGTGC GCGGCTTCGC CGGCCAGGAA TCGGTGACGA CGCTTGTCGA CGGCGTGCGC
CTCTACCCCG GCGCGGGCAC CGTCACGTTC CCGTTCTCGA CGTGGTCCGC CGAGCGCATC
GAGGTGCTGC GCGGGCCGGC GTCGGTGCTG TACGGCGAAG GGGCGATCGG CGGCGTCGCC
AACGTCGTGA CCCGGCGCCC GCGCCGCGAA CGCTCGACGA CGCTGCAGGC GGGCATCGGC
ACGCAAGGCG AAAAGCGCGT GGCGCTCGAT ACGACGGGCG CGCTCGGCCC GCGTCTTTCC
TATCGTTTCC ATCTGAGCGA CGAGCGCGCG CGCGGCTTCG TCGAGCGCGG CGACGCGCAC
GTGACGGCCG TCGGCGGCGC GCTGAAGCTC GATGTCGATT CGCGTCTGTC GATCACGCTC
GATTACGACT ACGGCCGCCA GAAGCCGGCG ACCTATTTCG GCGTGCCGGC GACGAACGGC
GTGCTCGAGC GCGCGCTGCG CGAGCGCAAC TACAACGTCG GCGACGCGAC GATCGCATAC
CACGACACCT GGACGCGGCT TGCCGCGACC TATCGCGCGG GCAACGGCGT GACGCTCGAT
GCCCAGCTCT ACTATCTCGC GACGCGCCGC CATTGGCGCA ACGCGGAATC GTATGCGCTC
GACCCGGCGG CGCGCACCGT CGCGCGCAGC GACTATCTCG AGATCTTCCA TCGCGAGCGG
CAGTTCGGCG AGCGCTTCAC CGCACGCATC GACTCGCGCG TGTTCGGCCG CGCGAACCGG
CTCGTGCTCG GCGCCGAGTT CAACCAGATC GCGTTCGACG GCGCGAACAA CGCGCCGTAT
CGCGGCGAAT CGACCGTCGC CGCCGCCGGC TTCGATCCCG GCGCGTTCGC GAGCCCCGAT
CCGACGCTGC CGCGCTTTCG CACGCGCACG CATCAGGCCG CGGCGTTCAT CGAGAACCGG
CTCGAGGTCC TGCCGCGGCT CGCGTGGGTG AGCGGGCTGC GTTACGACCA TCTGTCGTTT
CATCGCGACG ATCTGATCGC GGGCGGCGCG TTCGACAAGA CGTTCGCGCA CACCGGCTGG
CGCAGCGGGC TCGTCTACGA GATCGCGCCG GGCCTCGCCG CGTACGCGCA GTACACGACG
GGTGCGCAGG GCGTGGGCTC GCTCGTCACG CTGTCGGCGT CGCAGGCGAA CTACACGCTC
GCGACCGGTC GTCAATGGGA AGCGGGCATC AAGCACGAGA TCGACGGCGC TCGCGCGTAC
TGGACGCTCG CCGTCTACGA CATCGTCAAG CGCGGCCTCG TCAGCGTCGA TCCGCTGAAT
CCGGCGCGCG CGCAGCAGAT CGGCCGCCAG TCGTCGCGCG GCGTCGAGCT CGCGGGCGGC
GTGCGGCTGC CGGGCGGCGT GACGGTCGAC GCAAACGCGG CGTTGCTGCG CGCGCGCTAC
GACGCGTTCG GCCAGCGCGT CGGCGACACG GTCGTGCAGC GCGCCGGCAA CGTGCCGCAC
GACATCGCGC AGCAGAGCGC GAACCTGTGG ATCGGCTGGG CGTTCGCGCC CGGCTGGCGC
GCGAACGCGG GCCTGCGCTA CGTCGGTCCC CGCTACGGCG ACGACGCGAA CCGCGTGCCG
GTGCCTTCTT ACACGGTGTT CGACGCGTCG CTCGCGTGGC GGGCGACGCG CGACGTCGAC
CTCGCGTTCT ATGCGCGCAA CCTCGCGAAC CGCACGTACG CGGCGTCGAC GTCGAACGGC
GGCGCGCAAT GGCTGCTCGG CCCGTCGCGC TCGGTCGAGC TCGTCGCGAC GCTGCGCTTC
TAG
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| Protein sequence | MQAGPGSRVP MIGVRPRAMS SRLRESTSSE QSEAGGKRSE PRGADDSGAC GVRSGVGGGR
GDPPMSRAPH APSRRRAFGR GFAAAARAAH GAPVAHGAHA CFAAASRRAT AVERCVTALA
CAVTASGALA AEAEPADAAR GPHRELPTVR VTSDGAHASP LSTPLAAGSR LKLASLDTPA
SVEAITSAQI AARGDRTIVD AVTRATGFST AAAPGNGGTA LSVRGFAGQE SVTTLVDGVR
LYPGAGTVTF PFSTWSAERI EVLRGPASVL YGEGAIGGVA NVVTRRPRRE RSTTLQAGIG
TQGEKRVALD TTGALGPRLS YRFHLSDERA RGFVERGDAH VTAVGGALKL DVDSRLSITL
DYDYGRQKPA TYFGVPATNG VLERALRERN YNVGDATIAY HDTWTRLAAT YRAGNGVTLD
AQLYYLATRR HWRNAESYAL DPAARTVARS DYLEIFHRER QFGERFTARI DSRVFGRANR
LVLGAEFNQI AFDGANNAPY RGESTVAAAG FDPGAFASPD PTLPRFRTRT HQAAAFIENR
LEVLPRLAWV SGLRYDHLSF HRDDLIAGGA FDKTFAHTGW RSGLVYEIAP GLAAYAQYTT
GAQGVGSLVT LSASQANYTL ATGRQWEAGI KHEIDGARAY WTLAVYDIVK RGLVSVDPLN
PARAQQIGRQ SSRGVELAGG VRLPGGVTVD ANAALLRARY DAFGQRVGDT VVQRAGNVPH
DIAQQSANLW IGWAFAPGWR ANAGLRYVGP RYGDDANRVP VPSYTVFDAS LAWRATRDVD
LAFYARNLAN RTYAASTSNG GAQWLLGPSR SVELVATLRF
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