Gene BURPS1710b_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3196 
Symbol 
ID3689991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3504337 
End bp3505125 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID637729651 
Productpermease 
Protein accessionYP_334568 
Protein GI76808550 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.95618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCATA TCGATCCGCT GTATTCCCTG TCCGGCCTCT TCGTCGGTTT TCTCGTCGGC 
TTGACGGGCG TCGGCGGCGG TTCGCTGATG ACGCCGATCC TCGTGCTGCT GTTCAACGTC
CATCCGGCGA CGGCGGTGGG CACCGATCTG CTTTACGCGG CGCTCACCAA AGCGACGGGC
ACCTTCGTGC ACGGGCTCAA GGGCACGGTC GAATGGCGGA TCACCGGGCG TCTCGCGGCG
GGCAGCGTGC CCGCCGCCGC GATCACGCTG TGGTTCCTGC ATGCGCACGG CATGCATTCG
CAGGAAACGA GCCGGATGAT CCAGTTCGTG CTCGGCGCCG CATTGCTGCT CACGTCGCTG
TCGCTGCTGT TGCGCCCGCA GCTCGCCGCG TTCGCCGCGA AGCGCACGCG CGCGCTGCCG
CCCAACCCGA CGCGCACGCT CGCCGCGACC GTGCTCACGG GCGCCGTGCT CGGCGTGCTC
GTGTCGCTGA CCTCGGTCGG CGCGGGCGCG ATCGGCGTGA CGGTCCTGCT GCTGCTGTAC
CCGGCGCTGT CGACGACGCG CATCGTCGGC TCCGACATCG CGCACGCGGT CCCGCTCACG
CTCGTCGCGG GCGTCGGACA CTGGATGCTC GGCTCGGTCG ACTGGGCGAT GCTGGTGTCG
CTGCTGATCG GATCGGTGCC CGGAATCGTC GTCGGCAGCC ATCTGTCGGC GCGCGCGCCC
GAAGGGCTGC TGCGCCGGGT GCTCGCGGCG ACGCTCGTCG CGGTCGGCGC GAAGCTCGTG
CTGTCCTGA
 
Protein sequence
MPHIDPLYSL SGLFVGFLVG LTGVGGGSLM TPILVLLFNV HPATAVGTDL LYAALTKATG 
TFVHGLKGTV EWRITGRLAA GSVPAAAITL WFLHAHGMHS QETSRMIQFV LGAALLLTSL
SLLLRPQLAA FAAKRTRALP PNPTRTLAAT VLTGAVLGVL VSLTSVGAGA IGVTVLLLLY
PALSTTRIVG SDIAHAVPLT LVAGVGHWML GSVDWAMLVS LLIGSVPGIV VGSHLSARAP
EGLLRRVLAA TLVAVGAKLV LS