Gene BURPS1710b_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3160 
Symbolwzm 
ID3689162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3468626 
End bp3469459 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content56% 
IMG OID637729615 
ProductABC-2 type transport system integral membrane protein 
Protein accessionYP_334532 
Protein GI76811253 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA TTAGTGTTTT TACCTCTGCT CCGGGAGATC TCGTAAGCTC GGTCGCGCGG 
AACGCTTCGC TCATCTGGCA GATGACGAAG CGGGAAGTCG TCGGCCGCTA TCGCGGGTCC
GTACTCGGCT TGGCTTGGTC CTTCTTCAAT CCGCTGCTGA TGCTTGCGGT GTATTCGTTC
GTCTTTTCCT TTGTCTTCAA GTCGAGATGG GGAGGGGGCG CGGAGGATCA GGGGCGTGCG
CAATTTGCGA TGATGCTGTT CGTCGGCATG ACGATTCATG GATTGTTCGC CGAATGTGTC
AATCGAGCGC CGAGTCTGAT CCTGAACAAT CCGAGCTATG TGAAGAAGAT CGTGTTTCCG
CTGGAAATAC TGCCTATCGT CGCGCTTCTG TCCGCCTTCT TCCATACCCT CGTCAGTCTT
GCGGTGCTGC TGCTGGGTTT TGCCCTGTTC AAGCATTTCG TTTTCGCAAG TGCGTTGTTT
TTGCCGATTG TCCTGTTGCC ACTGATGCTG ATGTCGCTCG GCGTGGCTTG GTTTCTGGCC
GCCACCGGCG TGTTCGTGAG GGATGTCGGG CAGATTACGG GCTTGTTCAC GATGGTGCTG
ATGTTCCTGT CACCGGTGTT TTATCCGGCA TCCGCGTTGC CGGAAAAGTA TCGTTTCTGG
CTGGAGCTCA ATCCGCTGAC GCTATTCATC GAGCAGTCAC GCGGGATACT TCTCGAAGGC
AGAGTGCCGG ATTTCCATCC GCTCGGCCTC GCGTTTTTGG GGGGCGTGGC CGTTGCGTGC
GCGGGCTTCA AGTATTTTCA GTTAATGCGC AAGGGGTTTG CCGATGTCCT CTGA
 
Protein sequence
MSIISVFTSA PGDLVSSVAR NASLIWQMTK REVVGRYRGS VLGLAWSFFN PLLMLAVYSF 
VFSFVFKSRW GGGAEDQGRA QFAMMLFVGM TIHGLFAECV NRAPSLILNN PSYVKKIVFP
LEILPIVALL SAFFHTLVSL AVLLLGFALF KHFVFASALF LPIVLLPLML MSLGVAWFLA
ATGVFVRDVG QITGLFTMVL MFLSPVFYPA SALPEKYRFW LELNPLTLFI EQSRGILLEG
RVPDFHPLGL AFLGGVAVAC AGFKYFQLMR KGFADVL