Gene BURPS1710b_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3159 
Symbolwzt 
ID3689065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3467227 
End bp3468636 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content59% 
IMG OID637729614 
Productpolysaccharide ABC transporter, ATP-binding protein 
Protein accessionYP_334531 
Protein GI76809947 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCTG AATTGCCGGC AATCAGCGTC CAAGACGTCA GCAAGCGCTT TCGCGTATTT 
GCCAAGCCGG CAGACCGTCT GAAGGCCGCA GTTCGGCATC GCATCGGCGG TCTCGCGAAG
TTGGTGCCTG CTCGTTTGCT CGGAACGGAA GGTGCAAGCG AGTTTCATGC GCTGCAGCAT
GTGTCGTTTC ACGTACAAAA GGGCGAGACG ATCGGAATCA TCGGCCGCAA CGGCTCGGGA
AAGTCGACGT TGTTGCAGAT CATCTGCGGG ACGCTCACGC CGTCGGGTGG CCGGGTTGCG
ATCAACGGGC GCGTCGCCGC GCTGCTCGAA CTCGGAGCGG GCTTCAATCC GGAGTTCACT
GGCCGCGAAA ACGTATACAT GAACGCGGCG TTGCTGGGCC TCTCGAAAGC CCAGATCGAG
GAGCGGCTCG ACGCCATCTT CGCTTTTGCC GATATTGGCG GCTTCGTGGA TCAACCGGTG
AAGACCTATT CGAGCGGCAT GTACGTGCGG CTTGCTTTTG CCGTCATTGC GCACGTCGAC
GCCGACGTGC TCGTGATCGA CGAAGCGTTG GCCGTCGGGG ACGCATTCTT CACGCAAAAG
TGCATGCGTT TTCTGCGCGC GTTCATGGAG CGGGGCACCG TTTTATTTGT CAGCCACGAT
ACGAACGCGG TGGTCAATCT CTGTACCCGC GTCGTATGGC TTGACAAGGG GCGCGTTCGC
GAAATCGGTC CGGCAAAGGA CGTTTGCGAC TCGTATCTTG AGGCTTTCTA CGAGGAGCAG
CATCGCGCAT CGGGGCGAAA CGTTCGCGCG CTTGAGCGCA GCAGTGTCGT GCGCGCAATA
GCCGAAGGCG ATATGCGCGA CCAGCGCGCA TTGCTCATCA ACGCGTCGAA GCTGCGCAAC
GACGTGGAGT TGTTCCAGTT CACTGCCGAC GCGAAGAATT TCGGTCTTGG CGGCGCATCG
ATTGAGCATG TCGGCATCGA GGATGGCACG GGGGCGCCGC TGAATTGGGT AGTGGGGGGC
GAGATCGTTT GCATCCGCAT CGCCGTCAAA GCCCTGCAGA ACCTGGAGCG TGCCATCGTC
GGATTCATTG TCCGGGATCG GCTCGGGCAA AATCTGTTTG GCGACAACAC GTATCTCACG
ACCCTCAACG AGCCGTTCGC TGTCGCGGCG GGCGAAAGTT TTTCGGTCCG ATTCGGGTTC
AGAATGCCGG TCTTGCCGGT AGGCGATTAT TCGGTGACGG TTGCAGTCGC CGACGGTTCA
CAAAGCGACC ACGTGATCCA CCAATGGCTG CACGATGCGG TGTTGTTGAA GTCGCATTCG
ACGAGTGTCA GTACAGGATT AATAGGTATT CCAATGCATG AGATCGTGCT TGAGCGGGAT
ACGCTGAACG AAGTTGGGGC GGCGCAATGA
 
Protein sequence
MSSELPAISV QDVSKRFRVF AKPADRLKAA VRHRIGGLAK LVPARLLGTE GASEFHALQH 
VSFHVQKGET IGIIGRNGSG KSTLLQIICG TLTPSGGRVA INGRVAALLE LGAGFNPEFT
GRENVYMNAA LLGLSKAQIE ERLDAIFAFA DIGGFVDQPV KTYSSGMYVR LAFAVIAHVD
ADVLVIDEAL AVGDAFFTQK CMRFLRAFME RGTVLFVSHD TNAVVNLCTR VVWLDKGRVR
EIGPAKDVCD SYLEAFYEEQ HRASGRNVRA LERSSVVRAI AEGDMRDQRA LLINASKLRN
DVELFQFTAD AKNFGLGGAS IEHVGIEDGT GAPLNWVVGG EIVCIRIAVK ALQNLERAIV
GFIVRDRLGQ NLFGDNTYLT TLNEPFAVAA GESFSVRFGF RMPVLPVGDY SVTVAVADGS
QSDHVIHQWL HDAVLLKSHS TSVSTGLIGI PMHEIVLERD TLNEVGAAQ