Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3149 |
Symbol | rfe |
ID | 3690139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3454041 |
End bp | 3455147 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637729604 |
Product | glycosyl transferase family protein |
Protein accession | YP_334521 |
Protein GI | 76810784 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGCT TCGCCGTCGG CTTCATCGTC TCGCTTCTCG TCACGCTGCT CATCGTCCGC TATGCGCACC TGCACGAACG ATTCTCGATC GACAACGATC TTGCCGGCGT GCAGAAATTC CATGCGCGGC CGGTGCCGCG CGTGGGCGGC ACCGGCATCC TGATCGGGCT CGTCGTCGCG ACGGCGCTGC TGTCGCGGCG ATACCCGGCG ATCGCGGGCG GCATCCTCGG GCTCGCCGCG TGCGGGCTGC CCGCCTTCGC CTCCGGGCTG ATCGAAGACC TGACGAAGAA GGTGACGCCC GCGGTGCGGC TCGTCTGCAC GATGGCGGCC GCGGCGCTCG CGTTCGCGCT GATGGGCATC GCGATCACGC GCATCAGCGT GCCGCCCCTC GACTTCCTGC TCGGCTATAC GGCGATCTCG GCCGCGGTCA CGGTGCTCGC CGTCGCCGCG CTCGCGAACG CGGTCAACAT CATCGACGGC TTCAACGGCC TCGCGTCGAT GGTCGCGTTC ATGATGTTCG CGTCGCTCGC GTACGTCGCG TTCCAGGTCG GCGACCCGGT CGTGATGTCC GGCTCGATCG TGATGATGGG CGCGATCATG GGCTTTTTCA TCTGGAACTT CCCGGCGGGC CTCATCTTCC TCGGCGACGG CGGCGCGTAC TTCATCGGCT TCATGCTCGC CGAGCTCGCG ATCTCGCTCG TGATGCGGCA CCGCGAAGTG TCCGCGTGGT ATCCGGTGCT GCTGTTCATG TACCCGATCT TCGAGACCTG CTTCTCGATC TACCGGAAGA AATTCGTTCG CGGCATGTCG CCGGGCATCC CGGACGGCGT GCATCTGCAC ATGCTCGTCT ACAAGCGGCT GATGCGCTGG GCGGTGGGCA CGCGCGCCGC GCACGAGCTC ACGCGCCGGA ACTCGCTGAC CTCGCCCTAT CTATGGCTGC TCTGCCTCGT CGCGGTGATC CCCGCCACCC TGTTCTGGCA GCACACGATC CACCTGTTCG CGTTCGTGAT CGTGTTCGCG CTCACTTACG TGTGGCTCTA CGTAAGCATC GTCCGGTTCA AGTCGCCGAG ATGGATGGTG ATCCGCAAGC GGCTGCCGAA ACGGTGA
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Protein sequence | MLSFAVGFIV SLLVTLLIVR YAHLHERFSI DNDLAGVQKF HARPVPRVGG TGILIGLVVA TALLSRRYPA IAGGILGLAA CGLPAFASGL IEDLTKKVTP AVRLVCTMAA AALAFALMGI AITRISVPPL DFLLGYTAIS AAVTVLAVAA LANAVNIIDG FNGLASMVAF MMFASLAYVA FQVGDPVVMS GSIVMMGAIM GFFIWNFPAG LIFLGDGGAY FIGFMLAELA ISLVMRHREV SAWYPVLLFM YPIFETCFSI YRKKFVRGMS PGIPDGVHLH MLVYKRLMRW AVGTRAAHEL TRRNSLTSPY LWLLCLVAVI PATLFWQHTI HLFAFVIVFA LTYVWLYVSI VRFKSPRWMV IRKRLPKR
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