Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3141 |
Symbol | rfaC |
ID | 3691425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3446870 |
End bp | 3447937 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637729597 |
Product | lipopolysaccharide heptosyltransferase I |
Protein accession | YP_334514 |
Protein GI | 76809769 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGCCG CCCGGCGCGA TAAAATCCGT CCTTTCGGTC TGTGCCGGCC ACCGCCGGCC CTTTTTTTCA GCGTGCAAAA AATTCTGATC GTGCGCGTGT CGTCGCTCGG CGATGTCGTG CATAACATGC CGGTGATCGC CGATATCCGC CGGCGTCACC CCGATGCGCA GATCGACTGG CTCGTCGAGG AAGGCTTCGC CGATCTCGTG CGGCTCGTCG ACGGTGTGCG CGACGTGCTG CCGTTCTCGC TGCGGCGCTG GCGCAAGCGC TTGAGCGCGT CGCAAACGTG GCGCGAGATC CGCGCGTTCC GGCGGCGCCT CGCCGAGGAG CGCTACGACC TCGTGATCGA CTGCCAGGGG CTCATCAAGA CCGCGTGGGT CGCGAGCTGG GCGCGCGGGC CGCTTGTCGG CCTCGGCAAC CGCACCGACG GCGCCGGCTA CGAGTGGCCG GTGCGCTTCT TCTACGACAG GCGGGTGCCG ATCGCGCCGC GCACGCACGT TGTCGAGCGC TCGCGGCAGC TCGTCGCGGC GGCGCTGGGA GACCCCGCGC CGGCGCCCGG CGAGCCGATC GATTTCGGCC TCGACACGCA TGGCGCGGCG CGCGCGCTCG CGGCGCTCGA TTTGAATCTG CCGGTGCCCT ACGTGGTATT CGTGCACGCG ACCTCGCGCG CCGACAAGCA GTGGCCCGAC GAAGCGTGGA CCGGCCTCGG CGAGGCGCTC GTGCGGCGCG GCGCGTCGCT CGTGCTGCCG TGGGGCAGCG ACGCCGAGCG CGCGACGAGC GAGCGCCTCG CGAAGGCGTT CGGCGCGGCG GCGATCGTGC CGCCGAAGCT GTCGCTGCCC GCGGTCGTCG GCCTCGTCGA TGGCGCGGCG GCGACGGTCG GCGTCGATAC CGGCCTCGTC CACATCGCGG CGGCGCTCAA GCGTCCGACC GTCGAACTGT ACAATTTCGC GACAGCCTGG CGCACGGGCG GCTACTGGTC GCCCAACGTC GTCAATCTCG GCACCGCCGG CGCGCCGCCG TCCCTTTCGC AGGCGAAGGA CGCACTCGCG TCGTTCGGCC TCTTGTAA
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Protein sequence | MSAARRDKIR PFGLCRPPPA LFFSVQKILI VRVSSLGDVV HNMPVIADIR RRHPDAQIDW LVEEGFADLV RLVDGVRDVL PFSLRRWRKR LSASQTWREI RAFRRRLAEE RYDLVIDCQG LIKTAWVASW ARGPLVGLGN RTDGAGYEWP VRFFYDRRVP IAPRTHVVER SRQLVAAALG DPAPAPGEPI DFGLDTHGAA RALAALDLNL PVPYVVFVHA TSRADKQWPD EAWTGLGEAL VRRGASLVLP WGSDAERATS ERLAKAFGAA AIVPPKLSLP AVVGLVDGAA ATVGVDTGLV HIAAALKRPT VELYNFATAW RTGGYWSPNV VNLGTAGAPP SLSQAKDALA SFGLL
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