Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3105 |
Symbol | |
ID | 3690351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3411662 |
End bp | 3412774 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637729560 |
Product | transglycosylase SLT domain-containing protein |
Protein accession | YP_334478 |
Protein GI | 76810196 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTT GGTTATCGTG GCGTCCCAGT GAGCGGCATG CGCAGATGTT GCGCGCAGTG CTGCGTCGCG GGACGCGTGT CAGTCACCAT CTATTCAGCG TGGTCGGTTG TTGCGCGGTC GCGGTCGCGC TTGCGCTGTG GCTGCTGCCC AATGTGCGCG GCACGCTCGC GGCCAAGGTG ATGCCGTTCG TGTCGGCTGC GGTTCAGGCT GGTCCGGCGC GTCTGCTGAG CGGCCATCCG CTGCCGACTT TCGGCCCGGC GAACGCCGAC GAAAGCGAAT CGGTCAATGC GGACGCGGCG CCTTCGACGA CAGCCGCGCC GGCCGATGCC GGCGCGATGC TCGATGCGGC GCGCAACAGC CCGTCGCCCG TGTCGCTCGC GAAGCTCATC CCGACGCAGC GCGTCGCCGC CGATGCGCGC GACGACCGCG TGCTTGCGTC GAACCGCGAA CAGGCGCTCG TCGCCACCTA TCTCGCGCGC CGCTACCGCG TCGCGCAGGA GCCCGTCGGC CAGCTCGTGA AGGCGGCGTT CCAGACGGGG CGCGACGTCG GGCTCGATCC GCTGCTGATC CTCGCCGTGA TGGCGATCGA ATCCGGCTTC AATCCGTATG CGGAAAGCGG CGTCGGCGCC CAGGGGCTGA TGCAGGTGAT GTCGAAGGTC CATTCGGACA AGTTCGAGTA TTTCGGCGGC ACCGACGCGG CGTTGCAGCC TGTCGTCAAC ATCCAGGTGG GTGCGCTCGT GCTGAAGGAC TGCATCGCGC GCGGCGGCTC GCTCGCGGGC GGGCTGCGCC TGTACGTCGG CGCGACCACG CCCGACGACG GCGGTTATGG CGCGAAGGTG ATCGGCGAAC GCGACCGGTT GCGCGATGTC GCGCGCGGCC GCAAGGTGTC GATCTACGCG TCGCAGCAGC CGGCGCAGGG CGCGGTGACG GTGGCGACGG TGTCGACGTC GTCGGGTGCG ACGCAAAAGC GCGTGCGCAC GACGCTCGAC GGCGCGCATC CGCTGACGAT CAAGGCTGCC GCTGCGCCGA AGGCGCCGCA GCAGGACGAC GTGAGTGCCG ATACGGCGGC GTCGTCCAAG CACGAGACGG CCAGCCCGGA GCTCGGTACC TGA
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Protein sequence | MNAWLSWRPS ERHAQMLRAV LRRGTRVSHH LFSVVGCCAV AVALALWLLP NVRGTLAAKV MPFVSAAVQA GPARLLSGHP LPTFGPANAD ESESVNADAA PSTTAAPADA GAMLDAARNS PSPVSLAKLI PTQRVAADAR DDRVLASNRE QALVATYLAR RYRVAQEPVG QLVKAAFQTG RDVGLDPLLI LAVMAIESGF NPYAESGVGA QGLMQVMSKV HSDKFEYFGG TDAALQPVVN IQVGALVLKD CIARGGSLAG GLRLYVGATT PDDGGYGAKV IGERDRLRDV ARGRKVSIYA SQQPAQGAVT VATVSTSSGA TQKRVRTTLD GAHPLTIKAA AAPKAPQQDD VSADTAASSK HETASPELGT
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