| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3084 |
|---|
| Symbol | |
|---|
| ID | 3689392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 3389705 |
|---|
| End bp | 3390643 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637729540 |
|---|
| Product | ABC transporter, membrane permease |
|---|
| Protein accession | YP_334458 |
|---|
| Protein GI | 76811580 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCCC CTCTTAGCGG AAACGGAACC AGCGCGGCTG CCGCGCACCG CACGTCGCCG
CTGTCGGCGT TCGCCGACCG CTGGATTCCG AAACTGGTGC TCGCGCCGAG CGTCGCGATC
GCCTTGATCT TCATCTACGG CTTCATCGCC GTCACCGGCT ATCTGTCGCT GACGAATTCC
CGACTGTTGC CGAACTACGA CTTCGACGGC TTCGGCCGCT ATTCCGACCT GTTCGGCAAC
GACGTGTGGT GGACCTCGGC CGCGAACCTC GGCTGGTTCG GCGTCCCGTT CATCGGGATC
TGCGTCGTGC TGGGCCTGTT CCTCGCGATC CTGCTCGATC AGAAGATCCG CAACGAAGGC
GCGCTGCGCG CGGTGTTCCT GTATCCGATG GCGCTGTCGT TCATCGTCAC GGGCACCGCG
TGGCAGTGGA TCCTGAACCC GGGCCTCGGC CTCGAGAAGG TGATGCACGA CTGGGGCTTC
ACGAACTTCT CGTTCGGCTG GCTCGACGAT CCGGACAAGG CGATCTTCTG CGTCGTGATC
GCGGCCGTCT GGCAATCGAC GGGCTTCGTG ATGGCGCTGT TCCTCGCCGG CCTGCGCGGC
GTCGACGGCG AGATTTTCAA GGCCGCGCAG GTCGACGGCG CGACGCTGCC GACGATCTAC
CGCAAGATCG TGATCCCGAG CATGCGCCCG GTGTTCTTCT CGGTGCTGCT GATCCTCTGC
CATATCACGA TCAAGACCTT CGACCTCGTC GTCGCGCTGA CGGCGGGCGG GCCGGGCACG
TCCTCGTCGC TGCCCGCGAT GTTCATGTAC ACGTATTCGT TCAACCGCGG GCAGCTCGGC
GTCGGCGCGG CGTCGTCGGT GATGATGCTC GCCACCGTCG TGGCGGTGCT CGTGCCGCTC
ATGTACCTGG AATCGAGGAG CACCCGCAAT GCAGCCTAA
|
|---|
| Protein sequence | MAAPLSGNGT SAAAAHRTSP LSAFADRWIP KLVLAPSVAI ALIFIYGFIA VTGYLSLTNS
RLLPNYDFDG FGRYSDLFGN DVWWTSAANL GWFGVPFIGI CVVLGLFLAI LLDQKIRNEG
ALRAVFLYPM ALSFIVTGTA WQWILNPGLG LEKVMHDWGF TNFSFGWLDD PDKAIFCVVI
AAVWQSTGFV MALFLAGLRG VDGEIFKAAQ VDGATLPTIY RKIVIPSMRP VFFSVLLILC
HITIKTFDLV VALTAGGPGT SSSLPAMFMY TYSFNRGQLG VGAASSVMML ATVVAVLVPL
MYLESRSTRN AA
|
|---|
| |