| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3047 |
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| Symbol | spoT |
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| ID | 3688458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3358787 |
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| End bp | 3361156 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637729502 |
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| Product | guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase |
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| Protein accession | YP_334422 |
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| Protein GI | 76811711 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.392436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTA CACCATCGTC CGCCTCCTCG GAGGCCGGAC ACGCCGAGGC CACCGCATCG
TCGCACGCGC GTCAATATAT CGACGCGGTT CTCGAACAAT CGTTTCGCCA TCTGTTCGGG
CCGACCGCGA CACCCGAGCA GCCCCGCAAG CACGGCGTCG TTTCCATCGC GAAACTGACG
GCCGCGCTTG CCGATTACCT CGGCGCCGAG GAAATCAAAG AGGTCAAGGC GGCGTTCCAC
TTCAGCGACG AAGCCCACCT CGGTCAATAT CGCCAGAGCG GCGAACCCTA CATCACCCAT
CCCGTCGCCG TCGCGGAGAT CTGCGCCGGC TGGAAGCTCG ATGCGCAGGC GATCATGGCG
GCGCTGCTGC ACGACGTGAT GGAAGACCAG GGCGTGACGA AGAGCGAGCT CGCCGAGCGC
TTCGGCCCGA AGGTCGCCGA GCTCGTCGAC GGCCTGTCGA AACTCGACAA GATGGAGTTC
AGGAGCCGCG AGGAAGCGCA GGCGGAGAAC TTCCGCAAGA TGCTGCTCGC GATGGCGCGC
GACGTGCGCG TGATCCTCGT GAAGCTCGCC GATCGCCTGC ACAACATGCG CACGCTCGGC
GCGGTGCCGA TGGAGAAGCG CCGCCGCGTC GCGCGCGAGA CGCTCGACAT CTATGCGCCG
ATCGCGCACC GCCTCGGTCT GAACAATACG TATCGCGAGC TGCAGGACAT GAGCTTCGCG
AACTTCAATC CGCATCGCTA TGCGACGCTC GAAAAGGCGG TGAAGGCCGC GCGCGGCAAT
CGCCGCGAAG TGATCGGCAA GATTCTCGAA TCGGTGCAGC GCGCGATGGC GGATGCGAAG
ATCGACGCGG AAATCACCGG CCGCGAGAAG ACGATCTACA GCATCTACAA GAAGATGCGC
GACAAGCAGT TGTCGTTCTC GCAGGTGCTC GACGTGTACG GCTTCCGGAT CGTCGTCGAA
CATCCGCTCG ACTGCTACAC GTGCATCGGC GTGCTGCATG CGCTTTACAA GCCCGTGCCG
GGCAAGTTCA AGGACTACAT CGCGATCCCG AAGGTCAACG GCTATCAGTC GCTGCACACG
ACGCTCGTCG GCCCGTTCGG CGCGCCGATC GAGTTCCAGG TGCGCACGCG CAAGATGCAC
GAGATCGCGG AAGCGGGCGT TGCCGCGCAC TGGCTGTACA AGAACGGCGG CGCGGATCTG
AACGACGTGC AAAAGCGTGC GCATCAATGG CTCAAGTCGC TCCTCGACAT CCAGAGCGAG
GCGGGCGATT CAAGCGAATT CCTCGAGCAC GTGAAGATCG ACCTGTTCCC GGACGCGGTC
TACGTGTTCA CGCCGAAGTC GAAGATCATG GCGCTGCCGC GCGGCGCGAC TGCGCTCGAC
TTCGCGTATT CGATCCATAG CGATCTCGGC AATCAGTGCG TCGCCGTGAA GATCAACAAC
GAGCTATTGC CGTTGCGCAC CGAATTGAAG AGCGGCGATA TCGTCGAGGT GATCACCGCG
CCGTACTCGA AGCCGAATCC CGCATGGCTC GGCTTCGTGC GCACCGGCAA GGCGCGTTCG
GCGATCCGGC ATTATCTGAA GACGATGCGC CTGAACGAAT CGGTGCAACT GGGCGAGCGG
CTCGTCGATC AGAGCCTGAA GGGCTATGGG CTCGCGCTGG CCGACGTCAC GCCCGAGGTC
TGGGAAAAGC TCGTGCAGTG GACGGGCAAC AAGAGCCGTC AGGAGATCTT CGCGGACATC
GGCCTCGGTC GCCGCGTGGC CGCCGTGATG GCCAAACGCA TCGAGGTGCT GATGAGCGGG
CGCGACGCGG ACGACGATCT GCCGCGCGCG GAGCGTCATG CGGCCAACCA TGCGCCGCCG
GTGGTCATCA CCGGCACGGA AGGGATGTCG GTGCAACTGT CCGCGTGCTG CCGGCCGATT
CCGGGCGACG ACATCATGGG CTACATCGGC ATCGGGCTCG GGATGGCGAT CCACACGACC
GCCTGCCGCG TCGCGCAGCG CATCCACCGG CGCGATCCTG GCCGCTGGAT CGACGTCGCC
TGGGCGCCGC AGCCGGGCCG CCTGTTCGAC GTCGCGGTGA AGGCGCTCGT GAAGAACACG
AAGGGCATCT TCGCGCGCGT CGCGGCCGAT ATCACGTCGG CGGACGCGAA CATCGTCCAT
ATCGCGATGG ACGAGGATCT GACGCACGAA TCGACGGTGC TGCGCTTCGT GATTCAGGTG
AGCGACCGCG TGCACCTCGC GAACGTGATG CGCCGCGTGC GCACGAATCC GGACGTGATG
CGGATCATGC GCGAGCGCTC GAACGACGAT GTCGTGCATG CGCGCCACGA TGGCGGAATG
CGGATCGATC GCGAGCGGCA GGATTACTAG
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| Protein sequence | MSTTPSSASS EAGHAEATAS SHARQYIDAV LEQSFRHLFG PTATPEQPRK HGVVSIAKLT
AALADYLGAE EIKEVKAAFH FSDEAHLGQY RQSGEPYITH PVAVAEICAG WKLDAQAIMA
ALLHDVMEDQ GVTKSELAER FGPKVAELVD GLSKLDKMEF RSREEAQAEN FRKMLLAMAR
DVRVILVKLA DRLHNMRTLG AVPMEKRRRV ARETLDIYAP IAHRLGLNNT YRELQDMSFA
NFNPHRYATL EKAVKAARGN RREVIGKILE SVQRAMADAK IDAEITGREK TIYSIYKKMR
DKQLSFSQVL DVYGFRIVVE HPLDCYTCIG VLHALYKPVP GKFKDYIAIP KVNGYQSLHT
TLVGPFGAPI EFQVRTRKMH EIAEAGVAAH WLYKNGGADL NDVQKRAHQW LKSLLDIQSE
AGDSSEFLEH VKIDLFPDAV YVFTPKSKIM ALPRGATALD FAYSIHSDLG NQCVAVKINN
ELLPLRTELK SGDIVEVITA PYSKPNPAWL GFVRTGKARS AIRHYLKTMR LNESVQLGER
LVDQSLKGYG LALADVTPEV WEKLVQWTGN KSRQEIFADI GLGRRVAAVM AKRIEVLMSG
RDADDDLPRA ERHAANHAPP VVITGTEGMS VQLSACCRPI PGDDIMGYIG IGLGMAIHTT
ACRVAQRIHR RDPGRWIDVA WAPQPGRLFD VAVKALVKNT KGIFARVAAD ITSADANIVH
IAMDEDLTHE STVLRFVIQV SDRVHLANVM RRVRTNPDVM RIMRERSNDD VVHARHDGGM
RIDRERQDY
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