Gene BURPS1710b_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3015 
Symbol 
ID3691041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3321155 
End bp3323035 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content72% 
IMG OID637729470 
ProductTPR domain-containing protein 
Protein accessionYP_334393 
Protein GI76811375 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAT GCGGGGTTTC CCGTTTGCCC CGCGTCATGG AATCCGCTTT CGACCGCGCG 
TTCGCCGCGC ACCGCGCAGG CCGGCTCGAC GATGCCGAGC ACGGCTACCG GGCCGTGCTC
GCCGCCAATC CCGCCGATGC CGATGCGCTG CACCTGTTCG GGGTGCTGCG CCACCAGCAG
GGCCGGCACG AAGAAGCAGC CGACCTCGTC GGCCGCGCGG TCGGGTTGCG CCCGAACGAC
GCCGCGCTGC AACTGAATCT CGGCAACGCG CTCAAGGCGC TCGGCCGGCT CGACGATGCG
ATCGAGCGCT TTCGCAACGC GCTCACGCTC GCGCCGGCGT TCCCGCTCGC GCATTACAAC
CTCGGCAATG CGTACGCGGC GCAGGAGCGG CACGACGACG CGGTCGACGC GTTCAAGCGT
GCGCTCGCGC TCACGCCCGG CGACGCGTCG ATCCACAACA ACCTCGGCAA CGCGCTCAAC
GCGCTCGGCC GGCACGACGA CGCGCTTGAG GCGTTTCGCC GCGCGCTCGA GCTACGCCCC
GGCCACGCGG GCGCGCACAA CAATCTCGGG ATGGCGCTCG CCGCGCTCGG TGATACCGAC
GCGGCGATCG CGCACTTTCG CGCGGCGATC GCCGCAGAGC CGCACTTCGT CGCCGCGCAT
TTCAATCTCG GCAACGCGCT CGATGCGATC GGCCAACATG CGCAGGCGCA GCATGCGTTC
GAAGCCGCGC TCGCGCTGCA GCCGCGCTTC GCGCTTGCGC TGTTCGGGCT CGCGAACACG
CTCGCGGCGC GCGGCCGCCA TCGCGACGCG CTGCCGCATT ACGAACGCGC GGTCGGGCTC
GATCCGTCGT TCGTGCTCGC ATGGCTTAAC CTCGGCACCG CGCATCATGC GCTCGGCGCG
CACGAAATGG CGCTGCGCGC GTTCGATCAG GCGCTGCGGC TCGATCCGTC GCTCACGCTC
GCGCAAATGC ATCGCGCGGT CACGCTGCTC ACGCTGCGCG ATTTCGCGCG CGGCCTGCCC
GCGTACGAAG CGCGGCATGC GCTGCCGGGC GCGGCGCCGC TCGGGCCGCT GCCGCGCTGG
CAAGGCGAGC CGATCGCGAA CCGCACGCTG CTCGTGCGCG CCGAGCAGGG CTTCGGCGAC
ACGCTGCAGT TCGTGCGGCT CGTGCCGCTC GCGCGCGCGC GCTGCGCTCG GCTGATCCTG
CAGGTCCAGC CCGCGCTGCT GCCGCTCATC GCGCCGATGG CCGCGCGCTG GCGCGTGAGC
GTCGTGTCGG CCGACGCGGC GCGAACGCCC GCCGCCGATC TCGTCTGCCC GCTGTTGAGC
CTGCCGTTCG CGCTCGGGCT CGAATACGAC GCGATTCCGT CGCGCACCCC GTATCTCGAC
GTGCCCGACG CCGCGCGCCG CCGCTTTCGC GGCTCGCTCG GCGGGCAGGC CAAACGCAAG
TTCGGCATCG CCTGGTCCGG CAGCGCGCCG GTGCAGGACA ATCGCGCGCT ACCGCTCGAT
GCGCTTGCCC CGCTCTTCGC GCTCGCCGGC ATCGACTGGA TCGTGCTGCA GCCGACGCTG
TCGGATAGCG AGCACGCGGC GCTCGACGCG CATCCGGAGG CGGCTCGCAT CCATCGGCTC
GACGGCCTGA CCGATTTCGC GGCAACGGCC GCGCTCGTCG ATCGGCTCGA CGGCGTCGTC
GCGATCGACA CCGCGGTCGC CCACCTCGCC GGCGCGCTCG GCAAGCCGCT GTGGCTGATG
CTGCCCGTCG CCGCCGACTG GCGCTGGAGC ACGGGCGACG ACAGTGCGTG GTATCCGCGC
GCGCGGCTCG TCCGGCAATC GGAGCCGGGG CGGTGGGACG ACGTGGTCGC GACCGTTGCG
GGCGCAATCG CGCACGGATG A
 
Protein sequence
MGKCGVSRLP RVMESAFDRA FAAHRAGRLD DAEHGYRAVL AANPADADAL HLFGVLRHQQ 
GRHEEAADLV GRAVGLRPND AALQLNLGNA LKALGRLDDA IERFRNALTL APAFPLAHYN
LGNAYAAQER HDDAVDAFKR ALALTPGDAS IHNNLGNALN ALGRHDDALE AFRRALELRP
GHAGAHNNLG MALAALGDTD AAIAHFRAAI AAEPHFVAAH FNLGNALDAI GQHAQAQHAF
EAALALQPRF ALALFGLANT LAARGRHRDA LPHYERAVGL DPSFVLAWLN LGTAHHALGA
HEMALRAFDQ ALRLDPSLTL AQMHRAVTLL TLRDFARGLP AYEARHALPG AAPLGPLPRW
QGEPIANRTL LVRAEQGFGD TLQFVRLVPL ARARCARLIL QVQPALLPLI APMAARWRVS
VVSADAARTP AADLVCPLLS LPFALGLEYD AIPSRTPYLD VPDAARRRFR GSLGGQAKRK
FGIAWSGSAP VQDNRALPLD ALAPLFALAG IDWIVLQPTL SDSEHAALDA HPEAARIHRL
DGLTDFAATA ALVDRLDGVV AIDTAVAHLA GALGKPLWLM LPVAADWRWS TGDDSAWYPR
ARLVRQSEPG RWDDVVATVA GAIAHG