Gene BURPS1710b_3015 details

Gene Information

• Locus tag: BURPS1710b_3015
• ID: 3691041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 3321155
• End bp: 3323035
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637729470
• Product: TPR domain-containing protein
• Protein accession: YP_334393
• Protein GI: 76811375
• COG category: [R] General function prediction only
• COG ID: [COG0457] FOG: TPR repeat

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAT GCGGGGTTTC CCGTTTGCCC CGCGTCATGG AATCCGCTTT CGACCGCGCG 
TTCGCCGCGC ACCGCGCAGG CCGGCTCGAC GATGCCGAGC ACGGCTACCG GGCCGTGCTC 
GCCGCCAATC CCGCCGATGC CGATGCGCTG CACCTGTTCG GGGTGCTGCG CCACCAGCAG 
GGCCGGCACG AAGAAGCAGC CGACCTCGTC GGCCGCGCGG TCGGGTTGCG CCCGAACGAC 
GCCGCGCTGC AACTGAATCT CGGCAACGCG CTCAAGGCGC TCGGCCGGCT CGACGATGCG 
ATCGAGCGCT TTCGCAACGC GCTCACGCTC GCGCCGGCGT TCCCGCTCGC GCATTACAAC 
CTCGGCAATG CGTACGCGGC GCAGGAGCGG CACGACGACG CGGTCGACGC GTTCAAGCGT 
GCGCTCGCGC TCACGCCCGG CGACGCGTCG ATCCACAACA ACCTCGGCAA CGCGCTCAAC 
GCGCTCGGCC GGCACGACGA CGCGCTTGAG GCGTTTCGCC GCGCGCTCGA GCTACGCCCC 
GGCCACGCGG GCGCGCACAA CAATCTCGGG ATGGCGCTCG CCGCGCTCGG TGATACCGAC 
GCGGCGATCG CGCACTTTCG CGCGGCGATC GCCGCAGAGC CGCACTTCGT CGCCGCGCAT 
TTCAATCTCG GCAACGCGCT CGATGCGATC GGCCAACATG CGCAGGCGCA GCATGCGTTC 
GAAGCCGCGC TCGCGCTGCA GCCGCGCTTC GCGCTTGCGC TGTTCGGGCT CGCGAACACG 
CTCGCGGCGC GCGGCCGCCA TCGCGACGCG CTGCCGCATT ACGAACGCGC GGTCGGGCTC 
GATCCGTCGT TCGTGCTCGC ATGGCTTAAC CTCGGCACCG CGCATCATGC GCTCGGCGCG 
CACGAAATGG CGCTGCGCGC GTTCGATCAG GCGCTGCGGC TCGATCCGTC GCTCACGCTC 
GCGCAAATGC ATCGCGCGGT CACGCTGCTC ACGCTGCGCG ATTTCGCGCG CGGCCTGCCC 
GCGTACGAAG CGCGGCATGC GCTGCCGGGC GCGGCGCCGC TCGGGCCGCT GCCGCGCTGG 
CAAGGCGAGC CGATCGCGAA CCGCACGCTG CTCGTGCGCG CCGAGCAGGG CTTCGGCGAC 
ACGCTGCAGT TCGTGCGGCT CGTGCCGCTC GCGCGCGCGC GCTGCGCTCG GCTGATCCTG 
CAGGTCCAGC CCGCGCTGCT GCCGCTCATC GCGCCGATGG CCGCGCGCTG GCGCGTGAGC 
GTCGTGTCGG CCGACGCGGC GCGAACGCCC GCCGCCGATC TCGTCTGCCC GCTGTTGAGC 
CTGCCGTTCG CGCTCGGGCT CGAATACGAC GCGATTCCGT CGCGCACCCC GTATCTCGAC 
GTGCCCGACG CCGCGCGCCG CCGCTTTCGC GGCTCGCTCG GCGGGCAGGC CAAACGCAAG 
TTCGGCATCG CCTGGTCCGG CAGCGCGCCG GTGCAGGACA ATCGCGCGCT ACCGCTCGAT 
GCGCTTGCCC CGCTCTTCGC GCTCGCCGGC ATCGACTGGA TCGTGCTGCA GCCGACGCTG 
TCGGATAGCG AGCACGCGGC GCTCGACGCG CATCCGGAGG CGGCTCGCAT CCATCGGCTC 
GACGGCCTGA CCGATTTCGC GGCAACGGCC GCGCTCGTCG ATCGGCTCGA CGGCGTCGTC 
GCGATCGACA CCGCGGTCGC CCACCTCGCC GGCGCGCTCG GCAAGCCGCT GTGGCTGATG 
CTGCCCGTCG CCGCCGACTG GCGCTGGAGC ACGGGCGACG ACAGTGCGTG GTATCCGCGC 
GCGCGGCTCG TCCGGCAATC GGAGCCGGGG CGGTGGGACG ACGTGGTCGC GACCGTTGCG 
GGCGCAATCG CGCACGGATG A 

 

Protein sequence

MGKCGVSRLP RVMESAFDRA FAAHRAGRLD DAEHGYRAVL AANPADADAL HLFGVLRHQQ 
GRHEEAADLV GRAVGLRPND AALQLNLGNA LKALGRLDDA IERFRNALTL APAFPLAHYN 
LGNAYAAQER HDDAVDAFKR ALALTPGDAS IHNNLGNALN ALGRHDDALE AFRRALELRP 
GHAGAHNNLG MALAALGDTD AAIAHFRAAI AAEPHFVAAH FNLGNALDAI GQHAQAQHAF 
EAALALQPRF ALALFGLANT LAARGRHRDA LPHYERAVGL DPSFVLAWLN LGTAHHALGA 
HEMALRAFDQ ALRLDPSLTL AQMHRAVTLL TLRDFARGLP AYEARHALPG AAPLGPLPRW 
QGEPIANRTL LVRAEQGFGD TLQFVRLVPL ARARCARLIL QVQPALLPLI APMAARWRVS 
VVSADAARTP AADLVCPLLS LPFALGLEYD AIPSRTPYLD VPDAARRRFR GSLGGQAKRK 
FGIAWSGSAP VQDNRALPLD ALAPLFALAG IDWIVLQPTL SDSEHAALDA HPEAARIHRL 
DGLTDFAATA ALVDRLDGVV AIDTAVAHLA GALGKPLWLM LPVAADWRWS TGDDSAWYPR 
ARLVRQSEPG RWDDVVATVA GAIAHG