Gene BURPS1710b_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2998 
SymbolserC 
ID3689682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3303300 
End bp3304382 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID637729454 
Productphosphoserine aminotransferase 
Protein accessionYP_334377 
Protein GI162210102 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.748154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCT TTAATTTCTC CGCCGGCCCC GCGGCGATGC CCGAGGAAGT GCTGCGCCAG 
GCGGCCGCCG AAATGCTCGA CTGGAACGGC AGCGGCATGA GCGTGATGGA AATGAGCCAT
CGCGGCAAGG AATTCATGTC GATTCACGAG GCCGCGCTTG CCGACCTGCG CGAATTGCTC
GGTGTGCCCG CGAACTACCG GATCCTGTTC CTGCAGGGCG GGGGGATCGC CGAGAATGCG
ATCGTGCCGA TGAACCTGCT CGGCTCGCGC ACGACCGCCG ATTTCGTCAT CACGGGCTCG
TGGTCGCAGA AATCGTTCAA CGAGGCGAAG AAGTACTGCG TGCCGCATCT GGCCGCGACG
GGCAAGACGG ACGCGGGCTT CACGCGCGTG CCGGCGTTCT CCGAATGGCG GATGTCGGAC
GATCCGGCGT ACGTGCACCT GTGCACGAAC GAGACGATCG ACGGCGTCGA GACGTTCGAC
ATCCCCGATC TCGGCAACGT GCCGCTCGTC GCCGACGTGT CGTCGCACAT CCTGTCGCGT
CCGATCGAGA TCGAGAAGTA CGGCGCGATC TTCGGCGGCG CGCAGAAGAA CATCGGGATG
GCGGGCGTGA CGCTCGTGAT CGTGCGCGAG GATCTGCTCG ATCGCGCGCT GTCGATCTGC
CCGTCGGCGT TCGAATGGAA GACGGTCGCG CTCAACAATT CGCTCTACAA CACGCCGCCC
ACCTATGCGA TCTACATCGC GGGCCTCGTG TTCAAGTGGC TGAAGGCGCA GGGCGGCCTG
GCCGCGATCG AGGCGCGCAA CATCGAAAAA TCGAAGCTGC TGTACGACGC GATCGACGCG
AGCGGCTTCT ATCTGAACAA GGTCGAGAAG CCAGCGCGTT CGCGGATGAA CGTGCCGTTC
TTCCTCGCCG ACGAATCGCG CAACGAAGAC TTCCTTGCCG GCGCAAAAGA GCGCGGGCTG
CTGCAGTTGA AGGGCCACAA GTCCGTCGGC GGCATGCGGG CGTCGATCTA CAACGCGGTG
CCGCTCGCGG GCGTGCAGGC GCTCGTCGAG TACATGAAGG ATTTCGAGCG GCGCTGCGCG
TGA
 
Protein sequence
MRVFNFSAGP AAMPEEVLRQ AAAEMLDWNG SGMSVMEMSH RGKEFMSIHE AALADLRELL 
GVPANYRILF LQGGGIAENA IVPMNLLGSR TTADFVITGS WSQKSFNEAK KYCVPHLAAT
GKTDAGFTRV PAFSEWRMSD DPAYVHLCTN ETIDGVETFD IPDLGNVPLV ADVSSHILSR
PIEIEKYGAI FGGAQKNIGM AGVTLVIVRE DLLDRALSIC PSAFEWKTVA LNNSLYNTPP
TYAIYIAGLV FKWLKAQGGL AAIEARNIEK SKLLYDAIDA SGFYLNKVEK PARSRMNVPF
FLADESRNED FLAGAKERGL LQLKGHKSVG GMRASIYNAV PLAGVQALVE YMKDFERRCA