Gene BURPS1710b_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2899 
SymbolrseB 
ID3690108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3210773 
End bp3211825 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID637729355 
Productsigma factor algU regulatory protein MucB 
Protein accessionYP_334280 
Protein GI76811455 
COG category[T] Signal transduction mechanisms 
COG ID[COG3026] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGACGT TGCAGTTGAA TCAAGCCATC CTCGGTTGGA GACGGCTGCC GGCGCTGTTG 
CTGTGCGCGG CCGCGCTGTT GTCCGCCCAG CCCCGCGCCT TCGCGCAACC CGACGATCCC
GTGGCCACCC GGCGCCAGGC CGCCGAGTGG CTCGATCGCA TCCAGCAGGC CGCGCAGCAG
CAGAACTACG AAGGGACGTT CGTCTATCAG CGCGGCGCTT ACGTGCAATC GTCGCGGATC
GTTCACGTCG CGACGAAGGG CGACGGCGAA TACGAGCGCG TCGAAAGCCT CGACGGCAAG
CCCCGCAAGC TGCTGCGCCA CAACGACGAT CTCTACACGT TCGTGCCCGA ACGGCGGCTT
TGCGTCGTCG AGCGTCGGCA GAACAAGGAT TCGTTTCCCG CGCTGCTCGG CGCGAGCGGT
GAGCAGGTGC TGTCCGTCTA CGAGCCGAAG TCGCTCGGGC GCGACCGCGT CGCGGGCCTC
GACGCGCAGG TCGTCGAGCT CGTGCCGAAG GACGCGTACC GCTTCGCATA CAAGCTGTGG
ACCGACGCGA AGACGGGGCT TCTGCTGCGT TCGCAGACGC TCGACACCAA CGATCGCGTG
CTCGAGCAGA TCGCCTTCTC GCAGTTGCAG CTCGGCGTCG CTGCGCCGAG CCAGAAGACC
GCGATCGCGG CCGGCATGCG CAATCTCGGC GGCTGGACCG TCGTGCGGCC GCCCGTCGCG
CCCGTCGACA TCGAGGCGCA GGGCTGGCAG ATCGCACCGA CCGTCGCGGG CTTCCGCAAG
ATCCGCGAAG TGCGCCGCCC GATGGCCGCG CGCGACGCGA ACGATCCGCC GATTGCCGTC
GATCAGGCCG TGTTCACCGA CGGCCTCGCG ACGATCTCGG TCTTCATCGA ACCCGCCGAG
AAGAACAGCC GCAAGGAAGG CGCGGGCGGC ACGGGCGCGA CGCACGTGCT CGTCAAGCGC
CGCGGCGATT TCTGGATCAC GGTTCTCGGC GAAGCGCCGC CCTCGACGTT GCAGCAGTTC
GCGTCTGCCA TAGAATACAA GGCTTCCAAG TAA
 
Protein sequence
MRTLQLNQAI LGWRRLPALL LCAAALLSAQ PRAFAQPDDP VATRRQAAEW LDRIQQAAQQ 
QNYEGTFVYQ RGAYVQSSRI VHVATKGDGE YERVESLDGK PRKLLRHNDD LYTFVPERRL
CVVERRQNKD SFPALLGASG EQVLSVYEPK SLGRDRVAGL DAQVVELVPK DAYRFAYKLW
TDAKTGLLLR SQTLDTNDRV LEQIAFSQLQ LGVAAPSQKT AIAAGMRNLG GWTVVRPPVA
PVDIEAQGWQ IAPTVAGFRK IREVRRPMAA RDANDPPIAV DQAVFTDGLA TISVFIEPAE
KNSRKEGAGG TGATHVLVKR RGDFWITVLG EAPPSTLQQF ASAIEYKASK