Gene BURPS1710b_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2898 
SymbolmucD 
ID3689798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3209248 
End bp3210705 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content69% 
IMG OID637729354 
Productpeptidase 
Protein accessionYP_334279 
Protein GI76810909 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCCGC TTGCCGCGCA ATCGGCGACG GCGGCTCCGA ATGTCACGAC CACGCCCGCC 
GCAACGGGCG CCGCGCCTGC GGCGCGCGCG GGCCTGCCCG ATTTCGCGGA CCTCGTCGAG
CGGGTCGGCC CGGCGGTCGT CAACATCCGG ACGACGGCGA ACGTGCCGGC CGATACGCGC
GGCGCGCTGC CGCCCGGCCT CGACAACGGC GACATGTCGG AGTTCTTCCG CCGCTTCTTC
GGCATTCCGT TGCCGCAGGG GCCGGGCGGG CAGAAGAACG CGCCGAGCAC GCCCGATGCG
CCCGACACCG AACAGAACCG CGGCGTGGGC TCGGGCTTCA TCCTGTCGCC GGACGGCTAT
GTGATGACGA ACGCGCACGT CGTCGACGAC GCGGACACGA TCTACGTGAC GCTCACCGAC
AAGCGCGAAT TCAAGGCAAA GCTCATCGGC GTCGACGAGC GCACGGACGT CGCGATCGTG
AAGATCAACG CGTCGAGCCT GCCGACCGTC GCGATCGGCG ATTCGAACCG CGTGCGCGTC
GGCGAATGGG TCGTCGCGAT CGGTTCGCCG TTCGGCCTCG ACAACACCGT CACGGCCGGC
ATCGTCAGCG CAAAGGGCCG CAACACCGGC GACTATCTGC CGTTCATCCA GACGGACGTC
GCGGTCAACC CCGGCAACTC GGGCGGCCCG CTCATCAACA TGCAGGGCGA GGTGATCGGC
ATCAACTCGC AGATCTACAG CCGCACGGGC GGCTTCATGG GCATTTCGTT CGCGATTCCG
ATCGACGAGG CGATGCGCGT CGCCGAGCAA CTGAAGGCAT CGGGCAAGGT CACGCGCGGC
CGGATCGCGG TCGCGATCGG CGAGGTGACG AAGGAAGTGG CGGATTCGAT CGGCCTGCCG
AAGGCCGAAG GCGCGCTCGT CAGCAGCGTC GAGCCAGGCG GCCCGGCCGA CAAGGCGGGC
CTGCAGCCGG GTGACATCAT CCTGAAGTTC AACGGCCGTC CGGTGGAGGC GGCGTCGGAT
CTGCCGCGCA TGGTCGGCGA CACGAAGCCG GGCGCGAAGG CGACGGTGAC GGTGTGGCGC
AAGGGGCAAT CGCGCGATCT GCCGATCACG ATCGCGGAAT TCCCGGCCGA CAAGGCCGCG
AAGGCCGACA GCCGTCAGGC GCCGCAGCAG AAGCCGCGCA GCAGCGCGCT CGGCCTGACG
GTCAGCGACC TGTCGCCCGA GCAGTTGAAG ACGCTCAAGC TGCGCAACGG CGTGCAGATC
GACGCGGTCG ACGGCCCGGC CTCGCGCGCG GGGCTGCAGC GCGGCGACAT CGTGCTGCGC
GTCGGCGACG TCGACATCAC GAGCGCGAAG CAGTTCGTCG ACGTGACGTC GAAGCTCGAT
CCGCAGCGCG CGGTCGCGGT GCTCGTGCGG CGCGGCGAGA ACACGCAGTT CATCCCGATC
CGGCCGCGTC AGAAGTGA
 
Protein sequence
MTPLAAQSAT AAPNVTTTPA ATGAAPAARA GLPDFADLVE RVGPAVVNIR TTANVPADTR 
GALPPGLDNG DMSEFFRRFF GIPLPQGPGG QKNAPSTPDA PDTEQNRGVG SGFILSPDGY
VMTNAHVVDD ADTIYVTLTD KREFKAKLIG VDERTDVAIV KINASSLPTV AIGDSNRVRV
GEWVVAIGSP FGLDNTVTAG IVSAKGRNTG DYLPFIQTDV AVNPGNSGGP LINMQGEVIG
INSQIYSRTG GFMGISFAIP IDEAMRVAEQ LKASGKVTRG RIAVAIGEVT KEVADSIGLP
KAEGALVSSV EPGGPADKAG LQPGDIILKF NGRPVEAASD LPRMVGDTKP GAKATVTVWR
KGQSRDLPIT IAEFPADKAA KADSRQAPQQ KPRSSALGLT VSDLSPEQLK TLKLRNGVQI
DAVDGPASRA GLQRGDIVLR VGDVDITSAK QFVDVTSKLD PQRAVAVLVR RGENTQFIPI
RPRQK