Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2897 |
Symbol | lepA |
ID | 3688171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3206962 |
End bp | 3208755 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637729353 |
Product | GTP-binding protein LepA |
Protein accession | YP_334278 |
Protein GI | 76810470 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCATA TTCGCAATTT CTCGATCATC GCGCACATCG ACCACGGCAA GTCGACGCTC GCGGATCGCA TCATCCAGCT TTGCGGTGGC CTGTCCGACC GGGAGATGGA ATCGCAGGTG CTCGACTCGA TGGACCTCGA GCGCGAGCGC GGCATCACGA TCAAGGCGCA GACCGCCGCG CTCACCTATC GCGCGCGCGA CGGCAAGGTC TACAACCTGA ATCTCATCGA TACCCCGGGG CACGTCGATT TCTCGTACGA AGTGAGCCGC TCGCTGTCCG CGTGCGAGGG CGCGCTGCTC GTCGTCGACG CAAGCCAGGG CGTCGAGGCG CAGACGGTCG CGAACTGCTA TACGGCGATC GAGCTCGGCG TCGAGGTGGT GCCCGTCCTC AACAAGATCG ATCTGCCGGC GGCGAACCCG GAGAACGCGA TCGCCGAGAT CGAGGACGTG ATCGGCATCG ACGCGATGGA CGCGGTGCGC TGCAGCGCGA AGACGGGCCT CGGCGTCGAG GACGTGCTCG AATCGCTGAT CGCCAAGGTG CCGCCGCCGA AGGGCGATCC CGATGCGCCG CTGCAGGCGC TCATCATCGA TTCGTGGTTC GACAACTACG TCGGCGTCGT GATGCTCGTG CGCATCGTCA ACGGCACGCT GCGCCCGAAG GAAAGGATCA AGCTGATGGC GACCGATGCG CAGTATGCGG TCGAGCACGT CGGCGTGTTC ACGCCGAAGT CGCGCAATCT CGAATCGCTG TCTGCGGGGC AGGTGGGCTT CATCATCTCC GGCATCAAGG AACTGACGGC CGCGAAGGTC GGCGATACGG TCACGCATGC GACGAAGCCC GCGCCCGAGC CGCTGCCGGG CTTCAAGGAA GTGAAGCCGC AGGTGTTCGC GGGCCTCTAT CCGGTCGAGG CGAACCAGTA CGACGCGCTG CGCGAATCGC TCGAGAAGCT GAAGCTCAAC GACGCGTCGC TGCAGTACGA GCCCGAGGTG TCGCAGGCGC TCGGCTTCGG CTTCCGCTGC GGCTTCCTCG GCCTGCTGCA CATGGAGATC GTGCAGGAGC GGCTCGAACG CGAGTTCGAC ATGGACCTCA TCACGACCGC GCCGACGGTC GTCTACGAGG TCGTGCAAAG CGACGGCACG ACGATCATGG TCGAGAACCC GGCGAAGATG CCGGAGCCCG CGCGGATCGC CGAGATTCGC GAGCCGATCG TGACGGTCAA CCTGTACATG CCGCAGGATT ACGTCGGCTC GGTGATCACG CTGTGCGAGC AAAAGCGCGG CACGCAGATC AACATGCAGT ACCACGGCCG GCAGGTGCAG CTGACCTACG AGATCCCGAT GGCCGAAATC GTGCTCGATT TCTTCGATCG GCTGAAATCG GTGTCGCGCG GCTACGCGTC GATGGATTAC GAGTTCAAGG AATACCGGAC GTCCGATGTC GTGAAGGTCG ACATGCTGAT CAACGGCGAC AAGGTGGATG CGCTGTCGAT CATCGTGCAC CGTTCGCAGT CGCAGTATCG CGGCCGCGAA GTCGCGGCGA AGATGCGCGA GATCATTCCG CGCCAGATGT ACGACGTCGC GATCCAGGCG GCGATCGGCG CGCACATCAT CGCGCGCGAG AACATCAAGG CGCTGCGCAA GAACGTGCTG GCGAAGTGCT ACGGCGGCGA CATCACGCGC AAGAAGAAAC TGCTCGAAAA GCAGAAGGAA GGCAAGAAAC GAATGAAGCA GGTGGGTTCG GTCGAGATCC CGCAGGAGGC GTTCCTGGCG ATCTTGCGAG TCGAAGACAA ATAA
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Protein sequence | MDHIRNFSII AHIDHGKSTL ADRIIQLCGG LSDREMESQV LDSMDLERER GITIKAQTAA LTYRARDGKV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAI ELGVEVVPVL NKIDLPAANP ENAIAEIEDV IGIDAMDAVR CSAKTGLGVE DVLESLIAKV PPPKGDPDAP LQALIIDSWF DNYVGVVMLV RIVNGTLRPK ERIKLMATDA QYAVEHVGVF TPKSRNLESL SAGQVGFIIS GIKELTAAKV GDTVTHATKP APEPLPGFKE VKPQVFAGLY PVEANQYDAL RESLEKLKLN DASLQYEPEV SQALGFGFRC GFLGLLHMEI VQERLEREFD MDLITTAPTV VYEVVQSDGT TIMVENPAKM PEPARIAEIR EPIVTVNLYM PQDYVGSVIT LCEQKRGTQI NMQYHGRQVQ LTYEIPMAEI VLDFFDRLKS VSRGYASMDY EFKEYRTSDV VKVDMLINGD KVDALSIIVH RSQSQYRGRE VAAKMREIIP RQMYDVAIQA AIGAHIIARE NIKALRKNVL AKCYGGDITR KKKLLEKQKE GKKRMKQVGS VEIPQEAFLA ILRVEDK
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