| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2688 |
|---|
| Symbol | lasT |
|---|
| ID | 3688407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2981277 |
|---|
| End bp | 2982317 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637729144 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_334074 |
|---|
| Protein GI | 76809515 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.110135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGAAACG GTTGCGCGGG CCGCTCGATC GGCCGTTCGG ACGAGTGGGT TTGTCGGCGA
GTTGGCGATA CCATACCGGC ATCCCGATCA GTCGAAGTGA ACGTTTTGGA ATCTCAGCAG
AAACCGTCCG CGCCGCCTTC CGGCGCGGCC ACATCCCGTC CGGCGCGGAC CGCGCGCGGC
GGATTCACGT CGACGCGCTT CGTGCTCGTC GAGCCGAGCC ACCCCGGCAA CGTCGGCGCG
GCGGCGCGCG CGCTGAAGAC GATGGGTTTT TCCCGCCTCG TGCTCGTCGC GCCGCGCGTG
CCGCGCGTGC AGAGCGATCC GGAGGCGCTC GCGATGGCGA GCGGCGCCGA CGATGTGCTC
GCGTCCGCGC ACGTCGTGCC GACGCTCGCC GACGCGCTGA ACGGCGTGCA GTGGTCGCTC
GCGCTCACCG CGCGTTCGCG CGAGTACGGC CCGCCGCGGC TCGCGCCCCG CGCGGCCGCC
GCGAGCGCGC TTCAGCAGGT GCGCACGGGC GATATCGCGC TCGTGTTCGG CAACGAACGC
ACCGGCCTGT CGAACGAGCA CGTCGAGCGC TGCAGCGCGA TCGCGCACAT TCCGGCGAAC
CCCGCATACA GTTCGCTCAA TCTCGCGCAG GCGGTGCAGG TGCTCGCGTA CGAGCTGCGC
GTCGCGCTGC TCGAAGACGA CGAGTCGGCG GTGCCGCCGG ACGCCGCGCT CGGCACGCTC
GCGCAAAGCG ACGAGATCGA GCGGATGTTC GTCCATCTGG AAAATGCGCT GATCGCGCTC
GATTTCCTCG ATCCGCGCAA TCCGAAGAAG CTGATGCCGC GGCTGCGGCG GCTCTTCGCG
CGAACGGGGC TCGAACGCGA AGAAGTGAAT ATCGTTCGAG GCATCGCGAA GCACATCCTG
CTGAAGGCGG GCGGGGCGAA CGCGCGCGCG GGCGCTTCGG GCGAGGGCAA CGGCAACGGC
AACGGCAACG GCAACGGCAA CGGCGAAAGC GCCACCGGCG ACGCGGACTA TTCGGGCCGC
GACGTCAGCC GAGACGACTG A
|
|---|
| Protein sequence | MRNGCAGRSI GRSDEWVCRR VGDTIPASRS VEVNVLESQQ KPSAPPSGAA TSRPARTARG
GFTSTRFVLV EPSHPGNVGA AARALKTMGF SRLVLVAPRV PRVQSDPEAL AMASGADDVL
ASAHVVPTLA DALNGVQWSL ALTARSREYG PPRLAPRAAA ASALQQVRTG DIALVFGNER
TGLSNEHVER CSAIAHIPAN PAYSSLNLAQ AVQVLAYELR VALLEDDESA VPPDAALGTL
AQSDEIERMF VHLENALIAL DFLDPRNPKK LMPRLRRLFA RTGLEREEVN IVRGIAKHIL
LKAGGANARA GASGEGNGNG NGNGNGNGES ATGDADYSGR DVSRDD
|
|---|
| |