Gene BURPS1710b_2673 details

Gene Information

• Locus tag: BURPS1710b_2673
• Symbol: estA
• ID: 3689027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 2966061
• End bp: 2967893
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637729129
• Product: outer membrane autotransporter
• Protein accession: YP_334060
• Protein GI: 76811274
• COG category: [I] Lipid transport and metabolism; [R] General function prediction only
• COG ID: [COG3240] Phospholipase/lecithinase/hemolysin
• TIGRFAM ID: [TIGR01414] outer membrane autotransporter barrel domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATCG GTTCGAAGAC GAAGCTTGCG CTCGGCATCG CGCTGGCGAT GCCCGCCGCG 
GCCTGGGCGT ACACGTTCTA TGCGCTCGGC GACAGCCTGA CCGACAATGG CCGCGTCGTC 
AGGCTCACCG GCATCCTGCC GAACGCGACG TCGACGATCT TTCGCGGCGG CCGCTCGTCG 
AACGGCCCGG TCTGGGCCGA GTATCTGCCG GGCCTGATCG GCGCGCGATT CGCGCCCGAT 
GACGATTACG CGATCAACGG TGCGCTGAGC GGGCACGGCG GCTATCTCAA CATCATTCCG 
ACGCGCCCGA CATGGCGCAC GCTGCCCGGG TTCGCCGATC AGGTCGAGCA GTTGATCGCC 
GCACATCCGC GCCTGCGGCG CGACGATCTG GTCGGCGTCT GGATCGGCAC CAACGATCAG 
GACCTGACCA AGGCGAGCCT GAACGGCATC GAGCCGTTTC TCGGCGTGCC CCGGCCGGCC 
AATATCGCGG AAATGAGCGC GTATACGCTA ACGAACCTCA ATGCGCAGTT GCAGCGTTTG 
ATCGGCGCCG GCGCGCGTCA GTTCGTGATC CTGAACCTGA ACGACGCCGG CGGCACGCGG 
CCCGGATACG TCGACTACAA CGGCAAGCTG CCCGAGGACC TCGCGCGGTT TTCGCGGCAG 
GGCGTGAACG TCCATCTGTT CGACGTGTCG GCGCTGCTGA ACCAGATGCG CCGCAACCCG 
TCGGCCTACG GGCTGAACGA CACGCCGGAC GTGCAGTGCC GCTACGTTCC CTCCTGCAGC 
GGCGGCTCGG TCGAGCTGCA GAACACCTAT CTCACGGCGG ACGGCACGCA CATGATGACG 
AGCGTGCACG AGTACATCGC ACGCTACCTC GCGAATCAAC TGAATGCGCC GGCCGCGATT 
TCGACCGCGC CGGTGCTTGG GCTCGACGTG GCGCGGGCGG GCGCGCTGTC GGCGCTGAAC 
GCGGCCGACG GCGGGCCGCT CGGGCCAGCG CGCGTCGCGT GGTCGGACAG GCTGTCGCTT 
TTCGCGGACG TCGGCTACAC GCGCAACTTT CACGGCGCGG CGGGCGGCAT GAACGCATTC 
GATAGCGACG TCGAGATGTT CTCGATCGGC GCCGACTACA AGCTATCCGA AGCATCGAGA 
GCCGGTGCGC TCTTGTCGAG CGGCAATGCG AACGGCTCGC TCGCCGGCGG GCAAGGGCGG 
ATCGGGCTGC ATGCATACCG GCTCGGCGTC TATCACGCAT TCGAGCGCGC GGGCCTGTTC 
GTGCGCGCGT ATGCCGGCGC GGGCTGGAGC CGATATCGGC TCGATCGCGC CGCCGTGCTG 
CCGGGCGCCG TTCGCGCGAG CACCAGCGGC TTCGATTTCG GTGCGCTCGT CAAGGCCGGA 
TATCTGTTCG CGCTCGGCGG CGTGCGGCTC GGCCCCGTCG CCGACGTCGG CTATACGCAG 
CTTGTCGCGC GCGGCTACAC GGAAGACGGC GATCCGATTC TCGCGCAGAA CGTCGGCGTG 
CAGCGGCTGA AGGGCGTGAG CGCGGGAGCG GGCGTGTGCT TTGCCGCGCC GCTCGCGGCG 
ATCGGGCTGC GCGCCGGCGA GTTGTCCGCC GAGGCGCAAC TGCGGCACGA CGCATTCGGC 
GACCGTACGC TCGTCACCGC CCAGCGTTAT GCGCCCGGTC TGCCGATCGG CACGGCCGTC 
GACGGCGCGA GCGCAACCTA TGAGCGGCTG TCGGTCGCGC TCACCGTGAA TCCCGCGAAG 
CGGTGGCGGG GCAAGCTCGT CGTGCAGACG GACCTCGGTA CCGCGCCGCG CCGTTCGTAC 
ACGCTGCTCG CCCTGCTGGG CGGCACGTTT TGA 

 

Protein sequence

MTIGSKTKLA LGIALAMPAA AWAYTFYALG DSLTDNGRVV RLTGILPNAT STIFRGGRSS 
NGPVWAEYLP GLIGARFAPD DDYAINGALS GHGGYLNIIP TRPTWRTLPG FADQVEQLIA 
AHPRLRRDDL VGVWIGTNDQ DLTKASLNGI EPFLGVPRPA NIAEMSAYTL TNLNAQLQRL 
IGAGARQFVI LNLNDAGGTR PGYVDYNGKL PEDLARFSRQ GVNVHLFDVS ALLNQMRRNP 
SAYGLNDTPD VQCRYVPSCS GGSVELQNTY LTADGTHMMT SVHEYIARYL ANQLNAPAAI 
STAPVLGLDV ARAGALSALN AADGGPLGPA RVAWSDRLSL FADVGYTRNF HGAAGGMNAF 
DSDVEMFSIG ADYKLSEASR AGALLSSGNA NGSLAGGQGR IGLHAYRLGV YHAFERAGLF 
VRAYAGAGWS RYRLDRAAVL PGAVRASTSG FDFGALVKAG YLFALGGVRL GPVADVGYTQ 
LVARGYTEDG DPILAQNVGV QRLKGVSAGA GVCFAAPLAA IGLRAGELSA EAQLRHDAFG 
DRTLVTAQRY APGLPIGTAV DGASATYERL SVALTVNPAK RWRGKLVVQT DLGTAPRRSY 
TLLALLGGTF