| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2635 |
|---|
| Symbol | |
|---|
| ID | 3689941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2915027 |
|---|
| End bp | 2917087 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637729091 |
|---|
| Product | ABC transporter, periplasmic substrate-binding protein |
|---|
| Protein accession | YP_334022 |
|---|
| Protein GI | 76810684 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.63534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGGCGCC CGCGCCCGCA CGGTCGGCGG GCTGCGTTTG GCTGCAACCG GTTGCGAATG
GGTAGAATTC TCTCACATCG CCATCCTCGA ACGACTGCCA ACACTTCCAT GACGATCGGT
TCGCCCCGGG CCCGCCGGCC GCGATCGCCG CAACGCGCGG CGCCATCAGA ACAGGCCGCG
CGCGCCGCCG CGCCGCGACG GGCGGCCCGC GCGCGCGCCG CGCTCGCGCG CTTCGCGCGC
CGGGCGGCGG CGGGCGTCGC GCTCGCCTTC GTCGCGGCGC CCGCGGCGCA CGCCGTCTAC
GCGATCGCGC AGTACGGCGA GCCGAAGTAT CCGGCGGGCT TCGCGCATTT CGACTACGTG
AACCCCGACG CGCCGAAGGG CGGCACGCTC GTGCTCGCGA ACCCGAACCG GCTCACGACG
TTCGACAAGT TCAATCCGTT CACGATGCGC GGCAACCCGG CGCCCGGAAT CGACCTGCTG
TTCGAGAGCC TGACGACGGG CAGCGCCGAC GAGCCCGCCT CCGCGTACGG CCTGCTCGCG
GACGACATCG CCGTCGCGCC GGACGGCCTG TCGGTCACGT TCCATCTGAA TCCGCGCGCG
CGCTTCTCGA ACGGAGAACC CGTCACCGCG GCGGACGTCA AGTATTCGTT CGACACGCTG
AAGAGCCCGA AGGCGGCGCC GCAATACCCG GCGTACTACG CGGACATCGC GCGTGCGGTG
ATCGTCGACG CGGCGACCGT GCGCTTCGAG TTTCGCCGCA AGAACCGCGA GCTGCCGCTG
ATCGCGGGCG GCATCCCGGT GTTCTCGCGC AAATGGGGCG TGCGCGCGGA CGGCTCGCGC
ATCGCGTTCG ACCAGATCGC GTTCGAGCAG CCGATCGGCA GCGGCCCGTA CCTGATCGAG
CGCTACGACA GCGGGCGCAC GATCACGTAC CGGCGCAATC CCGCCTACTG GGGCGCGGCG
CTGCCCGTGC GGATCGGCAC GAACAACTTC GAGCGCATCG TCTACAAGCT GTACGGCGAC
GGCGTCGCGC GGCTCGAGGC GTTCAAGGCC GGCGAATACG ACGTGCTCGT CGAGTACATC
GCGCGCAACT GGGCGCGGCG CGACGTCGGC AAGCGCTTCG ACAGCGGCGA GCTCGTCAAG
CGCGAGTTCC GCCAGCACAA CGGCGCGGGA ATGCAGGGCT TCTTCATGAA CCTGCGCCGG
CCGCTGTTCC AGGACGTGCG CGTGCGCCAC GCGCTCGATC TCGCGTTCGA TTTCGAATGG
CTGAACCGGC AGCTTTTCTA TGGCGCGTAC ACGCGCCTGA ACAGCTATTT CGCCGATACC
GACCTGCAGG CGACGGGCAC GCCGAGCGCG GGCGAGCTCG CGCTGCTCGC CCCGTTGCGC
GCGCAGCTCG ACCCGGCCGT GTTCGGGCCG ATGACCGTGC AGCCGAGCAC CGATTTGCCC
GCGTCGCTGC GCGCGAACCT GCTGAAGGCG CGCGCGCTGC TCGCCGAGGC CGGCTGGACC
TACCGCGACG GCGCGCTGCG CAACGCGAAG GGCGAGCCGT TCGTGTTCGA GATTCTCGAC
GATTCGGGCT CGGCGTTCGA GCCGGTGGTC GCCGCGTACA TCCGCAATCT CGCGAAGCTC
GGGATCGTCG CGAAGTACCG GACGGCCGAT TTCGCGCTGC TGCAAAAGCG CCTCGACGCG
TTCGACTACG ACATGACGAC GGTCCGCTAC CCGGGCGTCC AGGTGCCGGG CGCCGAGCAG
GTCGCGCGCT TCGCGAGCCG CTATGCGGAC GAGCCGGGCT CGGACAACCT GACGGGGCTC
AAGTCGCCCG CGGTCGACGC GATCCTGAAG GCGCTCACGC AGGCCGAGAC GCGCGACGAA
CTGCTCGACG CGACGCACGC GCTCGACCGC GTGCTGATGC ACGGCTACTA TGCGGTGCCG
CAGTGGTACA GCGCCGTGCA CCGGATCGCG TTCAAGCGCA CGCTCGCCTA CCCGTCGGTG
CTGCCGCTGT ACTATTCGGC GGAAGGCTGG GTCGCCTCGA CGTGGTGGGC GAGGCCCGGG
CATGGCGCGT CCGCGCGTTA G
|
|---|
| Protein sequence | MWRPRPHGRR AAFGCNRLRM GRILSHRHPR TTANTSMTIG SPRARRPRSP QRAAPSEQAA
RAAAPRRAAR ARAALARFAR RAAAGVALAF VAAPAAHAVY AIAQYGEPKY PAGFAHFDYV
NPDAPKGGTL VLANPNRLTT FDKFNPFTMR GNPAPGIDLL FESLTTGSAD EPASAYGLLA
DDIAVAPDGL SVTFHLNPRA RFSNGEPVTA ADVKYSFDTL KSPKAAPQYP AYYADIARAV
IVDAATVRFE FRRKNRELPL IAGGIPVFSR KWGVRADGSR IAFDQIAFEQ PIGSGPYLIE
RYDSGRTITY RRNPAYWGAA LPVRIGTNNF ERIVYKLYGD GVARLEAFKA GEYDVLVEYI
ARNWARRDVG KRFDSGELVK REFRQHNGAG MQGFFMNLRR PLFQDVRVRH ALDLAFDFEW
LNRQLFYGAY TRLNSYFADT DLQATGTPSA GELALLAPLR AQLDPAVFGP MTVQPSTDLP
ASLRANLLKA RALLAEAGWT YRDGALRNAK GEPFVFEILD DSGSAFEPVV AAYIRNLAKL
GIVAKYRTAD FALLQKRLDA FDYDMTTVRY PGVQVPGAEQ VARFASRYAD EPGSDNLTGL
KSPAVDAILK ALTQAETRDE LLDATHALDR VLMHGYYAVP QWYSAVHRIA FKRTLAYPSV
LPLYYSAEGW VASTWWARPG HGASAR
|
|---|
| |