| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2616 |
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| Symbol | dehII |
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| ID | 3688763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2899974 |
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| End bp | 2900756 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637729072 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_334008 |
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| Protein GI | 76808917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0354122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGCA CCCCGCCCGC CTTCCCGAAG GCGATTCTCT TCGACGCGTA CGGCACGCTG
TTCGACGTGC ACGCGGTCGT CGCCGCGGCC GAGCAGCTGT TTCCGGGGCG CGGCGACGCG
CTGTCGCAGC TCTGGCGGCG CAAGCAGATC GAATATTCGC AACTGCGCAC GCTCGCCGAT
CCGGCGGGCG GGCGCTATCG GCCGTTCTGG GAGCTGACGC TCGACGCGCT GCGCTTTGCC
GCGCGCACGC TCGGCCTCGC GCTGTCCGCG GCCGCCGAGA AAAGACTGAT GGACGAGTAT
GCGTGCCTGT CGACGTACCC GGACACGGTG CCGACGCTGC GCGCGCTGCG TGCGCGCAGC
ACGCCGCCGA AGCTCGCGAT CCTGTCGAAC GGCAATCCGC AGATGCTCGA TATCGCGGTC
AAGAGCGCCG GGATGAGCGG CCTGTTCGAC CGCGTGCTGT CCGTCGACGC CGTTCGCGCG
TACAAGCCGT CGCCCGCCGC GTATGCGCTC GGCACCGCGG CGTTCGACGC GGCCCCCGCC
GACATCGCAT TCGTGTCGTC GAACGGCTGG GACGTCGCGG GCGCCGGCTG GTTCGGCTAC
CGGACCTTCT GGCTGAACCG CACGGGCGCG CCGCTCGAGG AGCTCGGCGC GGCGCCCGCG
GGCACGGGCG CCGGCATGGC CGAACTGCTC GCCTTTCTCG ACGCGCCGCG CGCCGCCGCG
AAAGCGGGCG GCCGAGCGCG CCCGGCGCCC CGCGTAAGCC GCCTCGGCGC GCCGCCGACC
TGA
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| Protein sequence | MPGTPPAFPK AILFDAYGTL FDVHAVVAAA EQLFPGRGDA LSQLWRRKQI EYSQLRTLAD
PAGGRYRPFW ELTLDALRFA ARTLGLALSA AAEKRLMDEY ACLSTYPDTV PTLRALRARS
TPPKLAILSN GNPQMLDIAV KSAGMSGLFD RVLSVDAVRA YKPSPAAYAL GTAAFDAAPA
DIAFVSSNGW DVAGAGWFGY RTFWLNRTGA PLEELGAAPA GTGAGMAELL AFLDAPRAAA
KAGGRARPAP RVSRLGAPPT
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