| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2604 |
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| Symbol | thiD |
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| ID | 3690370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2887375 |
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| End bp | 2889711 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637729060 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_333996 |
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| Protein GI | 76810176 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.354014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGTATT TTCGTGATAT AAAGCCGTGC GCACAACCCA TTTCGAACGG AATAAGTCCG
ATTGCACGGC CCGCGCGGCC GAGCCGCCGC GAGGAACGCA TCGCTTCAGA TGAAAAAAGG
TTTTTACTCC ATCATGGCCG CGCAGTTTTT CTCGTCGTTG GCCGACAGCG CTCTTCTCAT
CGCCGCGATC GCCCTGCTCA AAGACCTCCA CGCGCCGAAC TGGATGATAC CGCTCCTGAA
GCTGTTCTTC GTCCTGTCGT ACGTGGTGCT CGCCGCCTTC GTCGGCGCGT TCGCCGACTC
GCGCCCGAAA GGGCACGTGA TGTTCATCAC CAATTCGATC AAGGTCGTCG GCTGCCTCAT
CATGCTGTTC GGCGCGCACC CGCTCATCGC GTACGGGATC GTCGGCTTCG GCGCGGCCGC
GTATTCGCCC GCGAAATACG GCATCCTGAC CGAACTGCTG CCGCCCGAGC GGCTCGTCGC
CGCGAACGGC TGGATCGAAG GCACGACGGT CGGCTCGATC ATCCTCGGCA CCGTGCTCGG
CGGCGCGCTC ATCAGCCCGA AGATCGCGTC GCACGTGATC GCGCACACGC CGCCTTCGAT
CAACACGCCC GCCGAAGCCG CGATGCTCGT CATCATGACG ATCTACGTCA CGGCCGCGCT
CTTCAACCTG CGCATTCCCG ACACGGGCGC GCGCTACCCG AGGCAGCAGC ACGGCCCGCT
CAAGCTCGTC ACCGATTTCG CCGACTGCTT CATGGCCCTC TGGCGCGACA AGCTCGGCCA
GATCTCGCTC GCCGTCACGA CGCTCTTCTG GGGCGCGGGC GCGACGCTGC AGTTCATCGT
GCTCAAGTGG GCGGAGGTGT CGCTCGGCAT GTCGCTATCC GAAGGCGCGA TCCTGCAGGC
GGTGGTCGCG CTTGGCGTCG CGGCGGGCGC GATGATCGCC GCGAGCCGGA TTCCGCTGCG
CAAGTCGCTC ACCGTGCTGC CCGTCGGTAT CGTGATGGGC ATCGCGGTGA TGCTCATGGC
GTTCTACACG CGCGAGCTGT TCCCCGCGCA CTGGGCGCTG CACCTCGGGC GCCTGCATCT
GCCCGTCTAT CTGCTCGTCG CGTACGTGTT CCTGATGTTC GTCGGCGCGC TGTCCGGCTT
CTTCGTCGTC CCGATGAACG CGCTGCTCCA GCATCGCGGC CACGTGCTGC TGTCGGCCGG
CCATTCGATC GCCGTGCAGA ACTTCAACGA AAACCTGTCG GTGCTCGTGA TGCTCTGCGT
GTACGCGGCG CTCGTGTGGC TCGACGTGCC GGTCGGCATC GTGATCGTGC TGTTCGGCAC
CTTCGTGTGC CTGACGATGT GGCTCGTGAT GCGGCTGCAT GTCGCGAATC AGCGCCGCTT
CGACTCGGTC GCGCTGATCG GCGAATCGAA GCATTGAGCC GCTGCGCGCG CCGCCCATGC
CGCGCCGCGT GCAGCCCATC GACCCGGCGA CGCCGCGCGC CCTGCGCGTT TGCCCGTGAG
CGCCGCAACC TGTCCCGCCT CGCCGCCATG ACCCGACCGA TTCCCAACGC GCTCACGATC
GCCGGCTCCG ATTCGGGCGG CGGCGCCGGC ATCCAGGCCG ACCTGAAGAC GTTCTCCGCG
CTCGGCGCGT ACGGCGCGAG CGTGATCACC GCGCTCACCG CGCAGAACAC GCGCGGCGTG
ACGGGCGTGC ATGCGCCCGA CGCAGGCTTC GTGAGCGCGC AGCTCGATGC GGTATTCGAC
GACATCCGCA TCGACGCGGT GAAGATCGGC ATGCTCGCGA ACGCGGCGAT CGTGCGTGCG
GTCGCGGCGG CGCTCACGCG TCACACGCCG CGCCACATCG TGCTCGACAC GGTGATGATC
TCGAAGAGCG CGCATGCGTT GCTCGCGCCC GACGCGGTCG ACGCGCTGCG CAACGAATTG
CTGCCGCTCG CCGATCTCGT CACGCCGAAT CTGCCCGAGG CGGCCGCGCT GCTCGGCGTC
GCGGCCGCGA CGACCGAGGA CGACATGGTG CGCCAGGGCG AGACGCTCGT CGCGCGCGGC
GCGAAGGCGG TGCTGATGAA AGGCGGCCAC CTCGGCGCCG AGCGCGAAAG CCCGGACTGG
CTGATTCATG CGGGCGGCGC GCAACGCTTC GCGGGCGCGC GGCTGCCGGT CGCGAACACG
CACGGCACCG GGTGCACGCT GTCGTCGGCG ATCGCCGCGC TGCTGCCGCA GCGGGCGACG
CTCGCGGAGG CGATCGCCGA TGCGAAGATC TACCTGACGG GCGCGATCGG CGCGAGCGGG
CAGCTCGACG TCGGGCACGG CGTCGGGCCC GTGCATCACT TCTATCGATG GTGGTGA
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| Protein sequence | MTYFRDIKPC AQPISNGISP IARPARPSRR EERIASDEKR FLLHHGRAVF LVVGRQRSSH
RRDRPAQRPP RAELDDTAPE AVLRPVVRGA RRLRRRVRRL APERARDVHH QFDQGRRLPH
HAVRRAPAHR VRDRRLRRGR VFAREIRHPD RTAAARAARR RERLDRRHDG RLDHPRHRAR
RRAHQPEDRV ARDRAHAAFD QHARRSRDAR HHDDLRHGRA LQPAHSRHGR ALPEAAARPA
QARHRFRRLL HGPLARQARP DLARRHDALL GRGRDAAVHR AQVGGGVARH VAIRRRDPAG
GGRAWRRGGR DDRREPDSAA QVAHRAARRY RDGHRGDAHG VLHARAVPRA LGAAPRAPAS
ARLSARRVRV PDVRRRAVRL LRRPDERAAP ASRPRAAVGR PFDRRAELQR KPVGARDALR
VRGARVARRA GRHRDRAVRH LRVPDDVARD AAACRESAPL RLGRADRRIE ALSRCARRPC
RAACSPSTRR RRAPCAFARE RRNLSRLAAM TRPIPNALTI AGSDSGGGAG IQADLKTFSA
LGAYGASVIT ALTAQNTRGV TGVHAPDAGF VSAQLDAVFD DIRIDAVKIG MLANAAIVRA
VAAALTRHTP RHIVLDTVMI SKSAHALLAP DAVDALRNEL LPLADLVTPN LPEAAALLGV
AAATTEDDMV RQGETLVARG AKAVLMKGGH LGAERESPDW LIHAGGAQRF AGARLPVANT
HGTGCTLSSA IAALLPQRAT LAEAIADAKI YLTGAIGASG QLDVGHGVGP VHHFYRWW
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