| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2596 |
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| Symbol | dapE |
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| ID | 3688815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2877843 |
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| End bp | 2878994 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637729052 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_333988 |
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| Protein GI | 76809105 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCCGAA ACATGTCCGC CACCCTTGCC CTCACCGAAC AGTTGATCGC GCGCGCGTCC
GTCACGCCCG ACGATCAGCA CTGCCAGCAA TTGATGATCG AGCGCCTCGC CGCCCTCGGC
TTCGAGTGCG AAACGATCGC GTCGCACGGC GTGACGAACT TCTGGGCCGT CAAGCGCGGC
ACGGCCGGCC GCGCAGGCAA GCTGCTCGCG TTCGCGGGCC ATACCGACGT CGTGCCGACC
GGCCCGCTCG AGCAGTGGCG CTCGCCGCCG TTCGTGCCGA CGCACCGCGA CGGCAAGCTG
TACGGCCGCG GCGCGGCCGA CATGAAAACC TCGCTCGCGG GCTTCGTCGT CGCGGCCGAG
GAGTTCGTCG CCGCGCATCC GCAGCACCGC GGCTCGATCG GTTTCCTGAT CACGAGCGAC
GAGGAAGGCC CGGCCACCGA CGGCACCGTG AAAGTCGTCG AGGCGCTCGC CGCGCGCGGC
GAGCGCCTCG ATTACTGCAT CGTCGGCGAA CCGACCTCGA CGGCGACGCT CGGCGACGTC
GTGAAGAACG GCCGGCGCGG CTCGATGTCG GGCGAGCTCG TCGTCAAGGG CGTGCAAGGC
CATATCGCGT ATCCGCATCT CGCGAAGAAC CCGATCCATC TGCTCGCGCC GGCGCTCGCC
GAGCTCGCCG CCGAGCAATG GGACGAAGGC AACGAGTACT TTCCGCCGAC CACCTGGCAG
GTGTCGAACC TGCGCGCGGG CACCGGCGCG ACGAACGTGA TTCCGGGCCA CGCCGATCTG
CTGTTCAACT TCCGCTTCTC GACGGCGAGC ACGGTCGAGG GCCTGCAGGC GCGCGTGCAC
GCGATCCTCG ACAGGCACGG GCTCGATTAC ACGCTGAACT GGTCGGTGAG CGGCCTGCCG
TTCCTCACGC CGCGCGGCGA GCTGTCGAAC GCGCTCGACG CCGCGATCCG CGCGGAAACG
GGCGTCTCGC CCGAGCTGTC GACGACGGGC GGCACGTCCG ACGGCCGCTT CATCGCGCGC
ATCTGCCCGC AGGTGATCGA GTTCGGCCCG CCGAACGCGA GCATCCACAA GATCGACGAG
CACATCGACG TGCGCTTCGT CGACCCGCTG AAGAACGTGT ACCGCCGCGT GCTCGAACAA
CTGATCGCCT GA
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| Protein sequence | MVRNMSATLA LTEQLIARAS VTPDDQHCQQ LMIERLAALG FECETIASHG VTNFWAVKRG
TAGRAGKLLA FAGHTDVVPT GPLEQWRSPP FVPTHRDGKL YGRGAADMKT SLAGFVVAAE
EFVAAHPQHR GSIGFLITSD EEGPATDGTV KVVEALAARG ERLDYCIVGE PTSTATLGDV
VKNGRRGSMS GELVVKGVQG HIAYPHLAKN PIHLLAPALA ELAAEQWDEG NEYFPPTTWQ
VSNLRAGTGA TNVIPGHADL LFNFRFSTAS TVEGLQARVH AILDRHGLDY TLNWSVSGLP
FLTPRGELSN ALDAAIRAET GVSPELSTTG GTSDGRFIAR ICPQVIEFGP PNASIHKIDE
HIDVRFVDPL KNVYRRVLEQ LIA
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