Gene BURPS1710b_2587 details

Gene Information

• Locus tag: BURPS1710b_2587
• Symbol: def
• ID: 3690263
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 2866021
• End bp: 2866554
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637729043
• Product: peptide deformylase
• Protein accession: YP_333979
• Protein GI: 76809016
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.368495
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCGCG AGATTCTGAA GATGGGCGAT CCACGTTTGC TGGAAGTCGC CCGGCCGGTG 
GAGGCGTTCA ACACGCCGGA GCTGCACGCG CTCGTCGCGG ACATGTTCGA GACGATGCAT 
CACGCGAACG GCGCGGGGCT CGCCGCGCCG CAGATCGGCG TCGGGTTGCA GGTGATCATC 
TTCGGCTTCG GCAGCAGCGA GCGTTACCCG GAGGCGCCGC CCGTGCCGGA GACGGTGCTC 
GTCAATCCGA GCATCGAGTA CTTGCCGCCC GACCTGGAGG AGGGCTGGGA GGGCTGCCTG 
TCGGTGCCGG GGCTGCGCGG CGTCGTGAGC CGCTACCGGC GCGTGCGCTA CAGCGGCTTC 
GACCAGTACG GCGCGAAGCT CGAGCGGATC GCGGAAGGCT TCCACGCGCG GGTCGTCCAG 
CACGAATATG ATCATCTGAT CGGCAAGCTC TATCCGATGC GGATCACCGA TTTCTCGAAG 
TTCGGCTTCG CCGACGTGCT GTTCCCGGGG CTCGACGCGC AAGCGGACGA CTGA 

 

Protein sequence

MIREILKMGD PRLLEVARPV EAFNTPELHA LVADMFETMH HANGAGLAAP QIGVGLQVII 
FGFGSSERYP EAPPVPETVL VNPSIEYLPP DLEEGWEGCL SVPGLRGVVS RYRRVRYSGF 
DQYGAKLERI AEGFHARVVQ HEYDHLIGKL YPMRITDFSK FGFADVLFPG LDAQADD