| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2543 |
|---|
| Symbol | |
|---|
| ID | 3688519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2816755 |
|---|
| End bp | 2819565 |
|---|
| Gene Length | 2811 bp |
|---|
| Protein Length | 936 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637728999 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_333935 |
|---|
| Protein GI | 76809900 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCACT TGCAAACGCT CGAGCTACTT CAATGGGACT ATTGTCAGCG GATCACACTG
CCGCTTGATG GCGCAATCAT CACCGTGGCG GGTCCCAATG GCTCCGGCAA GACAACGCTG
CTCGACGCGA TGCGCACGTT ACTCGGTCTA GAGTGCTCGG GCGGCCGCAA CTACAAGACG
TATGCGCGTC ATGCGAACGC CGACACGACT TGGCTTCGTG CCACAGTAGA CAACAGACCA
CGTAGCCGCC AGAGTTCGAG TCGGCCGTTT GCGCGCAACC TACTGTATTC GGATCAGGTA
ACGCTTGCCT GCCGCATTGA CCGCAACGGT GGCGATTGGC AGCGGCGCTA TTTAATGGTC
GACGGGGATG CGCCGATCGA AGTTCTAGTC GAAAAGCCAG ACAAAGACTG GCTAGGCGTC
GAGCACTGGC GTAAGCGCTT GGAGGGGGCA GGTTTGTCCC GAGCCATCGC ACGCGTGTTA
GCGCTCGAAC AGGGTCAGAC TGACCGGCTT TGCGAGTACT CACCGAAGGA ATTGCTGCGC
TTGGTCTTCG ATGTTTTTGG CGACCAGGAA GTGCTCGATC GCTACGAAGA AGCCCGCAAG
CACCAGCGCG AGCTGGCGAC TGAAGTAGAG ACTGCCGAAC GGGAGCTAGC TCACAGCCAG
GCTCAGCTCG CTCAGTTGGA AGGTCGAGTT AATCTCTACC GCCAGTATCA AGCCAAGTTG
CGCGAACGAG AGTTTTTGGC GACCGAAGCG ATTCCGGTGC TGACGTGGTA TGAGGAGCGG
CAAGATGCAG CTATCAAGTT ACGTGAACTG CATCGCCAAC GCTTGCATCA GGCTCAGCTG
AAGCGTCAGT TGGCCGCGGA CAGCGCGATG CTGCTTCAGC TGCTGGAGCA GAAGCGTATA
GCTGCCGAAC GCGTGCGGCA ATTCGAGGCC GAAAGAGATG CCGCACTGGC GTTGCAGCGG
CAAGCGCGCG ACGTCGAGCG ACCGGTGGAG GATCTCGTCA AGCACGCTGA GGAGTTGCAA
ACTCTCGCGA CGGTAGAAAC CAATGCGGCC GACCTCGCTG AACACCTGAG AGTCTTGGAA
CAGCGCAAGG CCGAACTGGG CGAGCAATGG CGTTCGGTTA AGGCAGAGCG TGACAGCGCA
CAGGAGGGAC TGGATCGCTT GCAGGCTCAG CGGCAGGCTC CTCGGCCGAA GGAAGTTGAT
AACTTCTTGA AGCTGTTGCG TAGCGAAAAC GTTGCTCATC ACGTGATGGC TGATGTCGTC
GAGATTATTG ACGAGCGTTG GCGAAATGCA GCAGAAGGCG TCTTGCGCGG AGCGCGCTGG
GTGGTGGTGC TGGATGACGC GGCTAGTGAG GCACGGGCGA TGGCGTTCGC GGAACGCGAG
CGCTATCGAC ACTACATTGT GTCCGAATCC GCCGAAGCGC CTGTACGACC GGACCCAGAG
AGTTTGCTCG CAGTGTTGCG ATTTTCGGCA CCTGCTCCAG TATGGTTACT GAAACAACTC
GCGCAGATCC GTCGCGTGGA CAGTACGGAC GAGGGACTAA AGCAGAAGGG AGAATGGATA
ACGCAGGCCG GTTACTGGCG CGATGCCCGT GGAGGACGCA GTGTATGGGT GGACCCGGGC
GAGTACCAGT TCGGTGCCCA GGCGCTTGCT TCTCGAAAGG AAACTATCGA GCGACGTCTG
GTGCAATTGG ATCGTCAGCT AACGGGAATA GCGCGCGATC AACAAGATGT ACAGAGGCAA
CACACTGCGG CTGTCGAGGC CAGCAAGGGG CATCGCGCGG CTGAAGAACT GGCGCGGCGA
GGCGAGGAAT TCGAACGGGC GCGTCGACAA CTGCCGGCGC TGAGGGCTGC GCGCATTACG
GCTGGTGACC AGTGGCAGAG GCTTGACCGC GAATACGTGT CGGCGGGTAA GGGGCGTGAC
GATGCAGATA GGGCATACAA GGAGACACAC GAGCGGCTCG TAGCAACCGA GCGCGACGCG
GAGAAGTACG AGCGTGAGTG GCGTGAGCGC TTCGATATGC AGACCGCTCG CACCGCCAGC
TCACGAGAAC AGAAACGCCG GTTCCCGACG CGGTGGATCA CGCGTGAGAA GCTGATCGAT
CTGTGCGAAC GGTTCGAGAA CGCCAGGCAG GCGCAATTGC GCAGCGATGC AGTTGAGAAA
GACCTGCAAC AGGGTCAATG GGAAACGGAC GCCGCTGTTG AGGAGAAACA TACGCTAATG
CAGGCCACGG TGGGCGGGCA ACTGGCACAG CTAGAAGAGC GTAAGGCCAG CAACGCTGCT
GCGTCTATTG CGGTCAATAA CGCGCGCGAG CGTTACATCG ACGTACTGCG CGCTACCGTT
CGCCGTTACC GTAAGAACAT TGTGGATTTG GGCGTTCTTG CGGGTGTCGA AGTCAATGCT
GATCTGCCGC ATCTGGACAA CGACGACACC GTATTGCGTC AAGCCGAACT CAAGGTCAGC
TTCAATTTCG ACGGCAAGGG CCAGATCGGG TTGAACGACG GCGAAGCATC TGGCGGTCAG
CAGGTGATTA AGTCGCTGAT CTTGCTGGTG GGTTTGCTCA AAGACGACGA GATGTCCGGT
GGTTTCGTCT TCATCGACGA ACCTTTCGCG CACCTGGACG TACGAAACAT CCAACTGGTT
GGTCACTTCC TGAAATCCAC CAGGGCTCAG TACGTTCTGA CCACACCAAT AACGCACAAC
GTCGAGGTGT TCGAACCCGC GGACATCACA TTAGTCACAT CCAAGAAGCC TCGCGACTCG
CGCTGGGCAC CGCCTATTGG AGTGCTGCAG CGACGGATCG AGGCAATCTG A
|
|---|
| Protein sequence | MFHLQTLELL QWDYCQRITL PLDGAIITVA GPNGSGKTTL LDAMRTLLGL ECSGGRNYKT
YARHANADTT WLRATVDNRP RSRQSSSRPF ARNLLYSDQV TLACRIDRNG GDWQRRYLMV
DGDAPIEVLV EKPDKDWLGV EHWRKRLEGA GLSRAIARVL ALEQGQTDRL CEYSPKELLR
LVFDVFGDQE VLDRYEEARK HQRELATEVE TAERELAHSQ AQLAQLEGRV NLYRQYQAKL
REREFLATEA IPVLTWYEER QDAAIKLREL HRQRLHQAQL KRQLAADSAM LLQLLEQKRI
AAERVRQFEA ERDAALALQR QARDVERPVE DLVKHAEELQ TLATVETNAA DLAEHLRVLE
QRKAELGEQW RSVKAERDSA QEGLDRLQAQ RQAPRPKEVD NFLKLLRSEN VAHHVMADVV
EIIDERWRNA AEGVLRGARW VVVLDDAASE ARAMAFAERE RYRHYIVSES AEAPVRPDPE
SLLAVLRFSA PAPVWLLKQL AQIRRVDSTD EGLKQKGEWI TQAGYWRDAR GGRSVWVDPG
EYQFGAQALA SRKETIERRL VQLDRQLTGI ARDQQDVQRQ HTAAVEASKG HRAAEELARR
GEEFERARRQ LPALRAARIT AGDQWQRLDR EYVSAGKGRD DADRAYKETH ERLVATERDA
EKYEREWRER FDMQTARTAS SREQKRRFPT RWITREKLID LCERFENARQ AQLRSDAVEK
DLQQGQWETD AAVEEKHTLM QATVGGQLAQ LEERKASNAA ASIAVNNARE RYIDVLRATV
RRYRKNIVDL GVLAGVEVNA DLPHLDNDDT VLRQAELKVS FNFDGKGQIG LNDGEASGGQ
QVIKSLILLV GLLKDDEMSG GFVFIDEPFA HLDVRNIQLV GHFLKSTRAQ YVLTTPITHN
VEVFEPADIT LVTSKKPRDS RWAPPIGVLQ RRIEAI
|
|---|
| |