Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2537 |
Symbol | ldcA |
ID | 3688255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2808958 |
End bp | 2809899 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637728993 |
Product | L,D-carboxypeptidase A |
Protein accession | YP_333929 |
Protein GI | 76808879 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.286215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCCA CGCCCTGCAC GCCGCGCACG ATTCGTCTGC TTGCCCCGTC CGGTTATCCG CACGATCCCG CCGCGATCGA GCGCGCGCTC GAACGCCTGA GCGACGAGCA GCATCGAATC CAGAATCTCG ACGCGACGCA ACGCCGCTAT CAGCGCTTCG CCGGCACCGA CGGCGAGCGG GCAGGCGACC TGAACCGGCT TGCGGACCCG TCGTTGCCGC TGCCCGACAT CGGCCTCGCG GTGCGCGGCG GCTACGGCGC CGCGCGGATC CTGCACGGGC TCGACTATCG CGGCCTCGAA CGCCGGCTGC GCGACCAGCC GATCGCGCTC GTCGGCCACA GCGACTTCAC CGCGATCCAG CTCGCGCTCT ATGCGAAGGC GCGCGTGAAG ACGTTCGGCG GCCCGATGCT GTCGGCCGAT TTCGGCGCGC CGACGCCGAG CGAGTTCACG CTTGCGCATT TCTGGCAGAC CCTCACGCAG CCGACGACGA CGATCGTTTC CGACGTGCCG CAGACGCAGG TCGTCAACGC ATCGGGCACG CTATGGGGCG GCAATCTCGC GATCCTCGCG TCGCTCGTCG GCACGCCGTA CATGCCGCAG ATCGAAGGGG GGATCCTGTT CGTCGAGGAT GTGAACGAGC AGCCGTTCAG GATCGAGCGG ATGATCTATC AGCTGCATCT CGCGGGCATC CTCGCACGCC AGCAGGCGCT CGTGCTCGGC CAGTTCACGG GCGCGCGCCC GTTCGATTAC GACAACGGCT ACGACATGCA GGCGATGATC GAGCAGGTGC GCGGCGTGAT CGGCATCCCG ATCGTCACCG GGTTGCAGTT CGGTCACGTG CCCGATCTGC TGACGCTGCC GTTCGGCGCG CGCGCAGAGC TCGTCGCGAA CGAGCACGGT TTCAGGCTGA CAATGTCCGA CTATCCGCAT CTCGCCGCAT GA
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Protein sequence | MISTPCTPRT IRLLAPSGYP HDPAAIERAL ERLSDEQHRI QNLDATQRRY QRFAGTDGER AGDLNRLADP SLPLPDIGLA VRGGYGAARI LHGLDYRGLE RRLRDQPIAL VGHSDFTAIQ LALYAKARVK TFGGPMLSAD FGAPTPSEFT LAHFWQTLTQ PTTTIVSDVP QTQVVNASGT LWGGNLAILA SLVGTPYMPQ IEGGILFVED VNEQPFRIER MIYQLHLAGI LARQQALVLG QFTGARPFDY DNGYDMQAMI EQVRGVIGIP IVTGLQFGHV PDLLTLPFGA RAELVANEHG FRLTMSDYPH LAA
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