Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2511 |
Symbol | ispF |
ID | 3689024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2777751 |
End bp | 2778239 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637728967 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_333903 |
Protein GI | 76808522 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.928975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCA GAATCGGACA AGGCTACGAC GTGCACCAGC TCGTTCCCGG ACGCCCGCTC ATCATCGGCG GCGTGACGAT CCCTTACGAG CGGGGGCTGC TCGGCCACTC GGACGCCGAC GTGCTGCTGC ACGCGATCAC CGACGCGCTC TTCGGCGCGG CGGCGCTCGG CGACATCGGC CGCCACTTCT CCGACACCGA TCCGCGCTTC AAGGGCGCCG ACAGCCGCGC GCTGTTGCGC GAATGCGCAT CGCGCGTCGC GCAGGCGGGT TTTGCGATCC GCAACGTCGA CAGCACGATC ATCGCGCAGG CGCCGAAGCT CGCGCCGCAT ATCGACGCGA TGCGCGCGAA CATCGCGGCC GATCTCGACT TGCCGCTCGA TCGCGTGAAC GTGAAGGCGA AGACGAACGA GAAGCTCGGC TATCTCGGGC GCGGTGAGGG GATCGAGGCG CAGGCGGCCG CGCTCGTCGT GCGCGAAGCG GCCGCGTGA
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Protein sequence | MDFRIGQGYD VHQLVPGRPL IIGGVTIPYE RGLLGHSDAD VLLHAITDAL FGAAALGDIG RHFSDTDPRF KGADSRALLR ECASRVAQAG FAIRNVDSTI IAQAPKLAPH IDAMRANIAA DLDLPLDRVN VKAKTNEKLG YLGRGEGIEA QAAALVVREA AA
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