| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2507 |
|---|
| Symbol | ompR |
|---|
| ID | 3690878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2773879 |
|---|
| End bp | 2774604 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637728963 |
|---|
| Product | osmolarity response regulator |
|---|
| Protein accession | YP_333899 |
|---|
| Protein GI | 76812107 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.734124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA AAAACCCCTC CAAGATTCTC GTCGTCGACG ACGACCCGCG CCTGCGCGAT
CTGCTGCGCC GCTATCTCGG CGAGCAGGGC TTCAACGTGT ATGTCGCGGA GAACGCGACG
GCAATGAACA AGCTCTGGGT GCGCGAGCGT TTCGACCTGC TCGTGCTCGA CCTGATGCTG
CCGGGCGAGG ACGGCCTGTC GATCTGCCGG CGCCTGCGCG GCAGCAACGA TCGCACGCCG
ATCATCATGC TCACCGCGAA GGGCGAAGAC GTCGACCGCA TCGTCGGTCT CGAAATGGGT
GCCGACGACT ACCTGCCGAA GCCGTTCAAC CCGCGCGAGC TCGTCGCGCG CATTCACGCG
GTGTTGCGCC GCCAGGCGCC CGCCGAACTG CCGGGCGCGC CCTCCGAGAC CACCGAGGTG
TTCGAGTTCG GCGAGTTCTC GCTGAACCTC GCGACGCGCA CGCTCACGAA ATCCGGCCAG
GAGATTCCGC TCACGACGGG CGAGTTCTCG GTGCTGAAAG TGTTCGCGCG CCATCCGCGC
CAGCCGCTGT CGCGCGAGAA GCTGATGGAG CTCGCGCGCG GCCGGGAATA CGAAGTGTTC
GACCGCAGCC TCGATGTGCA GATCTCGCGC CTGCGCAAGC TGATCGAACC CGATCCGGGC
AGCCCGCGCT TCATCCAGAC GGTGTGGGGC CTCGGCTACG TGTTCATCCC CGACGGCGCG
GCCTGA
|
|---|
| Protein sequence | METKNPSKIL VVDDDPRLRD LLRRYLGEQG FNVYVAENAT AMNKLWVRER FDLLVLDLML
PGEDGLSICR RLRGSNDRTP IIMLTAKGED VDRIVGLEMG ADDYLPKPFN PRELVARIHA
VLRRQAPAEL PGAPSETTEV FEFGEFSLNL ATRTLTKSGQ EIPLTTGEFS VLKVFARHPR
QPLSREKLME LARGREYEVF DRSLDVQISR LRKLIEPDPG SPRFIQTVWG LGYVFIPDGA
A
|
|---|
| |