Gene BURPS1710b_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2454 
SymbolpncA 
ID3690879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2720331 
End bp2720969 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID637728910 
Productpyrazinamidase/nicotinamidase 
Protein accessionYP_333849 
Protein GI76812108 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGCA CCGACGATGT CCTTCTCGTG ATCGACGTGC AGAACGATTT CATGCCGGGC 
GGCGCGCTCG CGGTCGCGCA CGGCGACGAA GTCGTGCCGG CGATCAACCG GCTCGCCGCG
CGCTTCGATC ACGTCGTGCT GACGCAGGAT TGGCATCCGC GCGATCACGT GTCGTTCGCG
GCGAACCATC CGGGCCGCGC GCCGTTCTCG ACGCTCGCGC TGCCGTACGG CGAGCAGGTG
CTGTGGCCCG TCCACTGCGT GCAGGGCACG CACGGCGCGG CGCTGCACGG CGATCTCGAC
ATCCCGCACG CGCGGCTCGT GGTCCGCAAG GGGCATCGCG CGTCGGTCGA CAGCTACTCG
GCGTTCGTCG AGGCCGACCG CCGCACGCCG ACCGGGCTTG CCGGCTATCT GCGCGAAATC
GGCGCCAAGC GCGTGTGGTG CTGCGGGCTC GCGACCGACT ATTGCGTCGC GTGGTCCGCG
CTCGATGCGC GCGCCGCGGG CTTCGACGCG GCCGTGATCG AGGACGCGTG CCGCGCGATC
GATCTCGACG GCTCGCTCGC GCGCGCATGG GCGTCGCTCG CCGCGGCGGG CGTCGCGCGC
GTGCAGTCGG CCGAGGTTTG CCCGGGCGTC GATCCGTAG
 
Protein sequence
MQRTDDVLLV IDVQNDFMPG GALAVAHGDE VVPAINRLAA RFDHVVLTQD WHPRDHVSFA 
ANHPGRAPFS TLALPYGEQV LWPVHCVQGT HGAALHGDLD IPHARLVVRK GHRASVDSYS
AFVEADRRTP TGLAGYLREI GAKRVWCCGL ATDYCVAWSA LDARAAGFDA AVIEDACRAI
DLDGSLARAW ASLAAAGVAR VQSAEVCPGV DP