| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2423 |
|---|
| Symbol | lysR |
|---|
| ID | 3691758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2692535 |
|---|
| End bp | 2693446 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637728879 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_333818 |
|---|
| Protein GI | 76810404 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGT ACAAGCAGAT CGAAACCTTC GTGCGGGTAG CCGATGCGGG CAGCCTCGCG
GCGGCCGCGC TCGAGGAGGG CGTGTCGCCC GTCGTGCTCG GGCGGCGGAT CGACGCGCTC
GAAAAGCGCC TAGGCGTGAA GCTGATGTAC CGGTCGACGC GGCGGCTCGT GGTGAGCGAG
GACGGCGCCG CGTTCCTCGA GCGCTGCCGG GGGCTCCTGA CCGAATGGGC GCAAGCGGAG
AACGAGGTCG TCGCGGGGCG CCGCGCGGTG GGCGGGCATC TGATCGTGTC GGCGCCCGCC
GCGTTCGGGC GCAAGCATGT CGCGCCGCTC GCGCCCGCGT TCGTCGCGGA CAAGCCCGAC
TTGCAAATGT CGTTCAATCT GACCGACCGT GTCGTCGATC TCGTGCGCGA GGGCTACGAT
CTGTCGATCC GGATCGGCGG CGCGGTCGAT CCGAATTTCG TCGCGGTGAA GCTCGCGTCG
AACCGGCGCG TGGTGTGCGG CACGCCCGAG TATTTTCGCC GGCACGGCCG GCCGAGGACG
CTCGACGATC TCGCGAGCCA CAACTGCCTC GCGTTCAACC TGCAGGGCGG CCAGAACCGC
GGCTGGTATT TTCGGCGCAA CGGCAAGCTC GTGACGATGC GCGTATCGGG CACGCTCGAC
TGCAACGACG GCGAACTCCT GCATCGCTGG GTGTCGGAGG GGCTCGGGCT CGGTTGGCGC
TCGACGTGGG AGATCGCGCA GCAGCTCGCG CGCGGCGAGC TCGAGACGGT GCTCGACGAG
TACGCGCTGC CCGATTACGA CATCCTCGCC GTCTATCCGC AGCAGCGCTA CGTGCCCGCG
CGCGTGCGCT ATTTCATCGA CTATCTGCGC GACGTCTATG CGCGGCCGGG GTATTGGGAA
GGAGCCGAGT GA
|
|---|
| Protein sequence | MDRYKQIETF VRVADAGSLA AAALEEGVSP VVLGRRIDAL EKRLGVKLMY RSTRRLVVSE
DGAAFLERCR GLLTEWAQAE NEVVAGRRAV GGHLIVSAPA AFGRKHVAPL APAFVADKPD
LQMSFNLTDR VVDLVREGYD LSIRIGGAVD PNFVAVKLAS NRRVVCGTPE YFRRHGRPRT
LDDLASHNCL AFNLQGGQNR GWYFRRNGKL VTMRVSGTLD CNDGELLHRW VSEGLGLGWR
STWEIAQQLA RGELETVLDE YALPDYDILA VYPQQRYVPA RVRYFIDYLR DVYARPGYWE
GAE
|
|---|
| |