| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2402 |
|---|
| Symbol | pmrF |
|---|
| ID | 3691415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2675668 |
|---|
| End bp | 2676675 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637728858 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | YP_333797 |
|---|
| Protein GI | 76809759 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.745168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACC CTGAAACACG CGCGACGCAT CCTGAAGTTT CGATCGTCAT CCCCGTGTAC
AACGAGGAAG CGGGGCTCGC CGCGCTCTTC GCGCGGCTCT ACCCGGCGCT CGACGCGCTC
GGCACGCCGT ACGAGGTGAT CCTCGTCAAC GACGGCAGCC GCGACCGCTC GGCCGCCCTC
CTCGCCGATC AGTTCCGCGT GCGTCCGGAC ACGACGCGCG TCGTGCTGCT GAACGGCAAC
TACGGCCAGC ACATGGCGAT CCTCGCGGGC TTCGAGCAGT CGCGCGGCGA GATCGTCATC
ACGCTCGACG CCGATCTGCA GAACCCGCCG GAGGAAATCG GCAAGCTGAT CGCGAAGATG
CGCGAAGGCT ACGACTACGT CGGCTCGATC CGGCTGCAGC GCCAGGACAG CCTGTTCCGC
CGCAAGGCGT CGGCCGCGAT GAACCGGCTG CGCGAGCGCA TCACGCGCAT CAAGATGACC
GACCAGGGCT GCATGCTGCG CGCGTACAGC CGCCACATCA TCGACACGAT CAACCGCTGC
GGCGAGGTGA ACACGTTCAT CCCCGCGCTC GCGTACACGT TCGCGCAAAA CCCGACCGAA
ATCGAGGTCG CGCACGAAGA GCGCTTCGCG GGCGAATCGA AATACTCGCT GTACAGCCTG
ATCCGCCTGA ACTTCGATCT CGTCACAGGC TTCTCGGTCG TGCCGCTGCA ATGGCTGTCG
TTCATCGGCG TGATCCTCTC GCTCGGCTCG GCCGCGCTCT TCGTGCTGCT CGTCGTGCGC
CGCTTCATCG TCGGCGCGGA AGTGCAGGGC GTGTTCACGC TGTTCGCGAT CACGTTCTTC
CTGCTCGGCG TGATCATCTT CGCGCTCGGC CTGCTCGGCG AATACATCGG ACGAATCTAC
CAGCAGGTCC GCGCGCGGCC GCGCTACCTG ATCCACACCG TGCTCGAGGC GCGCGACGGC
AAGCCCGGCG TCACGCTCGC CGCCGAGCGC CGCGAGGCCG CGCGATGA
|
|---|
| Protein sequence | MTHPETRATH PEVSIVIPVY NEEAGLAALF ARLYPALDAL GTPYEVILVN DGSRDRSAAL
LADQFRVRPD TTRVVLLNGN YGQHMAILAG FEQSRGEIVI TLDADLQNPP EEIGKLIAKM
REGYDYVGSI RLQRQDSLFR RKASAAMNRL RERITRIKMT DQGCMLRAYS RHIIDTINRC
GEVNTFIPAL AYTFAQNPTE IEVAHEERFA GESKYSLYSL IRLNFDLVTG FSVVPLQWLS
FIGVILSLGS AALFVLLVVR RFIVGAEVQG VFTLFAITFF LLGVIIFALG LLGEYIGRIY
QQVRARPRYL IHTVLEARDG KPGVTLAAER REAAR
|
|---|
| |