| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2314 |
|---|
| Symbol | |
|---|
| ID | 3689931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2580938 |
|---|
| End bp | 2582128 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637728771 |
|---|
| Product | 2-nitropropane dioxygenase |
|---|
| Protein accession | YP_333710 |
|---|
| Protein GI | 76810674 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTT CCATTCCCTT TCCGCCGCTG ATGATCCGCG GCCGTTCGCT GTTGCCCATC
GTGCAGGGCG GGATGGGCGT CGGCATCTCC GCGCATCGGC TCGCCGGAAG CGTCGCGCGC
GAAGGCGCGC TCGGCACGAT CGCGAGCATC GACTTGCGCC ATCACCATAC CGATCTGATC
GAGCGCTGCA AGCAGCATCC GGATCGCGAG ACGATGGAGG CGGCGAACCT CGAGGCGCTC
GCGCGCGAGA TCCAGCGCGC GAAGACGTGG GGCGAGGGGC GCGGCATGAT CGCGGTCAAC
GTGATGAAGG CGGTGCGCTC GCACGCCGAC TATGTGCGCA TCGCATGCGA GTTCGGCGCG
GACGCGATCG TGATGGGCGC GGGCTTGCCG CTCGATCTGC CGGACATGAC GCAGGGGCAC
GACATCGCGC TGATCCCGAT CCTGTCGGAC AGCCGCGGCA TCGCGCTCGT GCTGAAGAAG
TGGATGAAGA AAGGGCGTCT GCCCGATGCG ATCGTGATCG AGCATCCGGC CCGCGCGGGC
GGCCATCTCG GCGTGACGAG CCTCGACGAC ATGGACGATC CGCGCTTCGA ATTCGCGCGG
GTCATCGACG AAACCCGGCA GACGTTCGCC ACGCTCGGCC TCGAGCGCGA GCGCATCGCG
CTCGTCGTCG CGGGCGGCAT CAACAGCCAC GAGGCGGTGC GCGCGGCGCT CGCCGAAGGC
GCGAACGGCG TGCAGGTGGG CACGCCGTTC GCGGTCACCG AGGAGGGCGA TGCGCATCCG
AACTTCAAGC GCGTGCTCGC GAACGCGAAG CCGGACGACA TCGTCGAGTT CTTGAGCGTC
ACGGGGCTGC CGGCGCGCGC GGTGAAGACG CCGTGGCTCG AGCGTTATCT GCGGCACGAG
ACGCGCATTC GCGCGAAGAT CGGCGCGCTC AAGCAGCGCT GCCCGTCGGC GCTCGAATGC
CTGAGTGTGT GCGGCTTGCG CGACGGCATC GAGCGCTTCG GCCACTTCTG CATCGATACG
CGCCTGGCCG CCGCGCTGCG CGGCGACGTC GCGAACGGGC TGTTCTTCCG CGGCCGCGAA
GCGCTGCCGT TCGGGCAGGC GATTCGCAGC GTGCGCGATC TGCTCGAGCT GCTGCTCACG
GGCACCGCAC CCGAAGCTGC GGCAAACCGT CCCACTTTCT CGTTGTCGTA A
|
|---|
| Protein sequence | MTGSIPFPPL MIRGRSLLPI VQGGMGVGIS AHRLAGSVAR EGALGTIASI DLRHHHTDLI
ERCKQHPDRE TMEAANLEAL AREIQRAKTW GEGRGMIAVN VMKAVRSHAD YVRIACEFGA
DAIVMGAGLP LDLPDMTQGH DIALIPILSD SRGIALVLKK WMKKGRLPDA IVIEHPARAG
GHLGVTSLDD MDDPRFEFAR VIDETRQTFA TLGLERERIA LVVAGGINSH EAVRAALAEG
ANGVQVGTPF AVTEEGDAHP NFKRVLANAK PDDIVEFLSV TGLPARAVKT PWLERYLRHE
TRIRAKIGAL KQRCPSALEC LSVCGLRDGI ERFGHFCIDT RLAAALRGDV ANGLFFRGRE
ALPFGQAIRS VRDLLELLLT GTAPEAAANR PTFSLS
|
|---|
| |