Gene BURPS1710b_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2308 
SymbolpotH 
ID3691577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2574502 
End bp2575431 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content63% 
IMG OID637728764 
Productputrescine transport system permease protein 
Protein accessionYP_333703 
Protein GI76811219 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC TTTCGTCCCT GTTTGCGTGG CCCGTCAGGA AGTTCGGCCT CACAGGCAGA 
ACGGCCGTGA TCGCGGGCCC GTTCTTCTGG CTCGTGCTGT TCTTCCTCGT GCCGTTCGTG
CTCGTCGTCA AGATCAGTTT CGCGCAGCTG CAGCTCGGCA TTCCGCCGTA TACGGAACTC
ACGGCGCTCG CCGACGGCGT GCTCAGCATC AAGCTGAACC TGCAGCACTA CGCGTTCCTG
TTCAGCGACA GCCTGTACTT CGCGACCTAC GTGAACTCGG TCGTCGTCGC GGCCGTCACG
ACGCTGCTGT GCCTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG CTCGAACCCG
GGCACGCGCA ACCTGCTGAT GATGGCGGTG ATGCTGCCGT TCTGGACGTC GTTCCTGATC
CGCGTGTATG CATGGATCGG CATCCTGAAG AACAACGGGC TGCTCAACAA CTTCCTGCTG
TGGACGGGGC TCATCAGCAC GCCGATCGAG CTGTACCGGA CGAACGTCGG TGTCTATATC
GGGATGGTCT ACTCGTATCT GCCGTTCCTC GTGATGCCGC TCTACGCGCA CCTGGTGAAG
ATGGACCTGC GCCTGCTCGA AGCCGCCTAC GACCTGGGCG CGAAGCCGTG GAAGGCGTTC
GTGCAGATCA CGCTGCCGCT GTCGAAGAAC GGGATCATCG CGGGCTGCCT GCTCGTGTTC
ATTCCGGCCG TCGGCGAGTA CGTGATTCCC GAGCTGCTCG GCGGCGCGAA CACGCTGATG
ATCGGCCGCG TGATGTGGAA CGAGTTCTTC AACAACGCGG ACTGGCCGAT GGCGTCGGCG
GTGACCTGCG CGATGGTGCT GCTGCTCCTC GTGCCGATGG CGATGTTCCA GCACTTCCAG
GCGAAGGAGC AGGAGGGCCA CCGCCGATGA
 
Protein sequence
MNALSSLFAW PVRKFGLTGR TAVIAGPFFW LVLFFLVPFV LVVKISFAQL QLGIPPYTEL 
TALADGVLSI KLNLQHYAFL FSDSLYFATY VNSVVVAAVT TLLCLLIGYP MAYYIARSNP
GTRNLLMMAV MLPFWTSFLI RVYAWIGILK NNGLLNNFLL WTGLISTPIE LYRTNVGVYI
GMVYSYLPFL VMPLYAHLVK MDLRLLEAAY DLGAKPWKAF VQITLPLSKN GIIAGCLLVF
IPAVGEYVIP ELLGGANTLM IGRVMWNEFF NNADWPMASA VTCAMVLLLL VPMAMFQHFQ
AKEQEGHRR