Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2308 |
Symbol | potH |
ID | 3691577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2574502 |
End bp | 2575431 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637728764 |
Product | putrescine transport system permease protein |
Protein accession | YP_333703 |
Protein GI | 76811219 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGC TTTCGTCCCT GTTTGCGTGG CCCGTCAGGA AGTTCGGCCT CACAGGCAGA ACGGCCGTGA TCGCGGGCCC GTTCTTCTGG CTCGTGCTGT TCTTCCTCGT GCCGTTCGTG CTCGTCGTCA AGATCAGTTT CGCGCAGCTG CAGCTCGGCA TTCCGCCGTA TACGGAACTC ACGGCGCTCG CCGACGGCGT GCTCAGCATC AAGCTGAACC TGCAGCACTA CGCGTTCCTG TTCAGCGACA GCCTGTACTT CGCGACCTAC GTGAACTCGG TCGTCGTCGC GGCCGTCACG ACGCTGCTGT GCCTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG CTCGAACCCG GGCACGCGCA ACCTGCTGAT GATGGCGGTG ATGCTGCCGT TCTGGACGTC GTTCCTGATC CGCGTGTATG CATGGATCGG CATCCTGAAG AACAACGGGC TGCTCAACAA CTTCCTGCTG TGGACGGGGC TCATCAGCAC GCCGATCGAG CTGTACCGGA CGAACGTCGG TGTCTATATC GGGATGGTCT ACTCGTATCT GCCGTTCCTC GTGATGCCGC TCTACGCGCA CCTGGTGAAG ATGGACCTGC GCCTGCTCGA AGCCGCCTAC GACCTGGGCG CGAAGCCGTG GAAGGCGTTC GTGCAGATCA CGCTGCCGCT GTCGAAGAAC GGGATCATCG CGGGCTGCCT GCTCGTGTTC ATTCCGGCCG TCGGCGAGTA CGTGATTCCC GAGCTGCTCG GCGGCGCGAA CACGCTGATG ATCGGCCGCG TGATGTGGAA CGAGTTCTTC AACAACGCGG ACTGGCCGAT GGCGTCGGCG GTGACCTGCG CGATGGTGCT GCTGCTCCTC GTGCCGATGG CGATGTTCCA GCACTTCCAG GCGAAGGAGC AGGAGGGCCA CCGCCGATGA
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Protein sequence | MNALSSLFAW PVRKFGLTGR TAVIAGPFFW LVLFFLVPFV LVVKISFAQL QLGIPPYTEL TALADGVLSI KLNLQHYAFL FSDSLYFATY VNSVVVAAVT TLLCLLIGYP MAYYIARSNP GTRNLLMMAV MLPFWTSFLI RVYAWIGILK NNGLLNNFLL WTGLISTPIE LYRTNVGVYI GMVYSYLPFL VMPLYAHLVK MDLRLLEAAY DLGAKPWKAF VQITLPLSKN GIIAGCLLVF IPAVGEYVIP ELLGGANTLM IGRVMWNEFF NNADWPMASA VTCAMVLLLL VPMAMFQHFQ AKEQEGHRR
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