Gene BURPS1710b_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2307 
SymbolpotI 
ID3688689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2573687 
End bp2574505 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID637728763 
Productputrescine transport system permease protein 
Protein accessionYP_333702 
Protein GI76811825 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGA ATCGCTATCT GCAGGTGCTG ATGCTCGCGA TCGGCTTCGG TTTCCTCTAT 
ATCCCGATCG CGAGCCTCGT CGTCTATTCG TTCAACGATT CGAAGCTCGT CACCGTGTGG
TCCGGTTTCT CGACGCGCTG GTACGCGGCA CTCGTCGAGG ACGACGAGCT GATCGCGGCC
GCGTGGCTGT CGCTGAAGAT CGCGGTGATG ACCGCGTTCG CATCGGTGTT CATCGGCACG
TGGGCGGGTT TCGTGCTCGC GCGGATGGGC CGCTTTCGCG GCTTCGCGCT CTACAGCGGG
ATGATCAACG CGCCGCTCGT GATTCCCGAG GTGATCCAGG GCATCTCGCT GCTGCTGCTG
TTCATCGAGC TCGGCAAGTG GTTCGGATGG CCCGCCGGCC GTGGGATGTT CACGATCTGG
CTCGGCCACG TGATGCTGTG CATCTCGTAC GTCGCGATCA TCGTGCAGTC GCGCGTGCGC
GAGCTGAACC CGTCGCTCGA GGAGGCGGCG CTCGATCTCG GCGCGACCCC GTTCAGGGTG
TTCTTCTCGA TCACGCTGCC GCTGATCTCC CAGGCGCTCG TGTCCGGCTG GCTGCTGTCG
TTTACGCTGT CGATCGACGA TCTGGTGCTG TCGGCGTTCC TGTCCGGACC CGGCTCGACG
ACGCTGCCGC TCGTCGTGTT CTCGCGCGTG CGCCTCGGCC TGAATCCGGA GATGAACGCG
CTCGCGACGC TGTTCATCGT CGCGGTGACG ATCGGCGTCG TGGCGGCGAA CTATGTGATG
CTGCGTCAGG AGAAGAGGCG GATGGCCGAA GCCGCCTGA
 
Protein sequence
MKPNRYLQVL MLAIGFGFLY IPIASLVVYS FNDSKLVTVW SGFSTRWYAA LVEDDELIAA 
AWLSLKIAVM TAFASVFIGT WAGFVLARMG RFRGFALYSG MINAPLVIPE VIQGISLLLL
FIELGKWFGW PAGRGMFTIW LGHVMLCISY VAIIVQSRVR ELNPSLEEAA LDLGATPFRV
FFSITLPLIS QALVSGWLLS FTLSIDDLVL SAFLSGPGST TLPLVVFSRV RLGLNPEMNA
LATLFIVAVT IGVVAANYVM LRQEKRRMAE AA