| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2302 |
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| Symbol | |
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| ID | 3691274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2568372 |
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| End bp | 2569721 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637728759 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | YP_333698 |
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| Protein GI | 76810652 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC GCGACGCCAT TCCGATCGTT CCCATTTCGC CGCCCGACGT GGGCGTGCTC
GTGTCGTACC TCGAGCAGGA TCCGCAGCCG ATGATCGTGC TCGATCCGTC GTACCGGATC
CTCGCGGCGA ACGCCGCGTA TCAGCGGCAG TTCGGCATCG CCGGCGAGGC GCACGTCGGG
CGGCGCTGCT ACCAGGTCTC GCATCACTAC GACATGCCGT GCGACCAGGC GGGCGAGCAT
TGCCCGATGA AGCAGGCGGG CGAATCGCGC GGCCTGAACC GCGTGCTGCA CATCCATCAC
ACGCCGCGCG GGCCCGAGCA CGTCGATGTC GAGCTGCGGC CGATCTTCGA TGCGCGCGGC
GCGGTGATCG CATACGTCGA GCGGCTGACG ACCGTGCGCA GCGCGTCGGC GAAGCCGAGC
GGCGAGGGGC TCGTCGGCGG CTCGGACGCG TTCAACGCGG CGCTGTCCGC GTTGCAGCGG
GTCGCGCCTT CGATGCTGCC CGTGCTGCTG CTCGGCGAAT CGGGCACGGG CAAGGAGCTG
TTCGCGCGTG CGTTGCACGA GGCGAGCGCG CGTGCGATGG GGCCGTTCGT CGTCGTCGAT
TGCTCGGGGA TTGCCGAGAC GCTGTTCGAA AGCGAGCTGT TCGGCTACGA GAAAGGCGCG
TTCACCGGCG CGAGCGCGCG CAAGCCCGGC CTCGTCGAGA CCGCGCAGGG CGGCACGCTG
TTTCTCGACG AGATCGGCGA CGTGCCGCTG TCGATGCAGG TGAAGCTGCT GCGCCTCATC
GAATCGGGCA CGTTCCGGCG GGTGGGCGGC GTCGAGGCGC TGTGCGCGGA TTTCCGCCTC
GTCGCGGCGA CCCACAAACC GTTGAAGGCG ATGATCGGCG ACGGCCGCTT CCGGCCGGAT
CTGTACTACC GGATCAGCGC GTATCCGATT TCGCTGCCCG CGGTGCGCGA GCGCCCGGGC
GACATGCCGC TCCTCGTCGA CTCGATCCTG CGCCGGATCG CGGCGCTCGG GCCGGTTGCC
GGGCAGCATT TCGTCGTGGC GCCCGATGCG CTCGCGCGGC TCGAGGCGTA CGCGTGGCCG
GGCAATATCC GCGAGCTGCG CAACGTGCTC GATCGCGCGT GCCTGCTCAC CGACGACGGC
GTGATCCGCG TCGAGCACCT GCCCGACGAG GTGGCGGGCG GCGCGCGCAT CGAGCCGGGC
GCGCCGGCGA AGCTGTCCGA CGACGAGCTC GCGCGAATCG CGCGCGCGTT CGGCGGCACG
CGGCGCGCGC TCGCCGAGCG TGTCGGGATG AGCGAGCGCA CGCTGTACCG GCGGTTGCGC
GCGCTGGGGA TCGCGACGCG GGAGGCGTGA
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| Protein sequence | MNQRDAIPIV PISPPDVGVL VSYLEQDPQP MIVLDPSYRI LAANAAYQRQ FGIAGEAHVG
RRCYQVSHHY DMPCDQAGEH CPMKQAGESR GLNRVLHIHH TPRGPEHVDV ELRPIFDARG
AVIAYVERLT TVRSASAKPS GEGLVGGSDA FNAALSALQR VAPSMLPVLL LGESGTGKEL
FARALHEASA RAMGPFVVVD CSGIAETLFE SELFGYEKGA FTGASARKPG LVETAQGGTL
FLDEIGDVPL SMQVKLLRLI ESGTFRRVGG VEALCADFRL VAATHKPLKA MIGDGRFRPD
LYYRISAYPI SLPAVRERPG DMPLLVDSIL RRIAALGPVA GQHFVVAPDA LARLEAYAWP
GNIRELRNVL DRACLLTDDG VIRVEHLPDE VAGGARIEPG APAKLSDDEL ARIARAFGGT
RRALAERVGM SERTLYRRLR ALGIATREA
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