Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2297 |
Symbol | czcA |
ID | 3688169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2562504 |
End bp | 2564408 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637728753 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_333692 |
Protein GI | 76810468 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTTT CGATTCCTTC GCTCCCGAGT CTCGCGCCGC GCGCGCTCGC CGCGGCCGCC GCCATCGCGT TCGCGGGCGC GCTCGCCGGC TGCGCGCTGT TCGCGCCGAG CGACGCGCCG CCCGCGATGC CGTCGCCCGC GCACTACGGC GCGACACCGC TGCCCGAGCG CACGGCCGCC GCGCAGGGGC TCGCGCAACG CTTTGACGTG GGCGCGCAGC CGGTGCCCGA CTGGTGGAAG CGCTATCGCT CGCCCGCGCT CGACGCGCTC GTCGACGAAG GGCTGCGCAA CAGCCCGACG CTCGCCGCCG CCGAAAAGAG CCTGAGCGCC GCGCGCGAAC AGTTGCGCGC GCAGATCGGC AGCTCGCTGC TGCCGACGAT CGACGCCGGC GGCCAGGCGA CGCGCGAGCG CGCGCTCGGC ATGCCGGCGT TCGGCCCGCA GACGGTGCTC TACAACGTGT TCGCGGGCCA GTTGCAGGCG AGCTACACGC TCGATCTGTT CGGCGCCGCG CGTTTCGCGA ACCGCGCGCT GTCCAAGCGC GTCGACGTGA ATGCGTACCA GCTCGAATCC GCGCGGCGCG CGCTCGCCGC GAACATCGTG ACGGCCGCCG TCACATCGGC CGCGCTCGCC GAGCAGGTCG CGACGACCGA GCGGCTCGTC GCGCTCGCGC GCGAACAGGC GAGCGACGCG GCCGCGCGCC ACCGGCTCGG CGCGGCGTCG CGCACCGACA TGCTGAACAC GCGGCAAAGC GCGGCGGCGC TCGAGGCGAG CCTGCCCGCG CTGCGCCAGC AAGCGCAGAG CGCGCGCCAT GCGCTTGCCG TGCTGCTCGG CCGCACGCCG GATGCCGCGC CCGCGAATCT CGCGCTCGCC GATCTGCATC TGCCGCAGGA CGTGCCGGTC GTCGTGCCGT CGACGCTGCT GCAGGCGCGG CCCGACATCC GCGCGGCCGA GGCCGGCTTG CAGGCTGCGG CGGCCGAGGT CGGCGTCGCG ACCGCGCAGA TGTTCCCGCA GTTGTCGCTG TCCGCGTCGA TGGGCCATGC GGGCTTCAAG TGGCCGGCGA TGCTGTCGGG CGCGGGCGCG ATCTGGAGCG TCGGCGCATC GCTCACGCAG CCGCTCTTTC ACGGCGGCGC GCTGCTCGCG CAGCGCCGCG CGGCGCGCGC GAGCTACGAC GCGGCCGTCG ACCAGTACAA GCAGACGGTG CTCGCCGCCT TCCAGGATGT GGCCGACAAG CTCGCCGCGC TCGAGAACGA CGCGAGCGCA CTCGACGCGT CGAACCGCTC GGCCGTCGCC GCGCGCGGCG CGTTCGACGA CACCGCGGCG CGCGTGCGGC TCGGCGCGCT GCCGCCGTCG GCCGCTCGCG CGAGCGAGCA GCAGTACCGC AACGCGCGGC TCGACGAGAT CCGCGCGACG GGCACGCGGC TTGTCGATAC CGCGCGGCTC TTTCAAGCGA TGGGCACGCC GATCGACGGC GGGCCGGATG CGCGGCGTGT GGGCGGTATG AGCGGCTCGA ATGATGTGAG TGATGTGAGT GGATCGAGCG GTGTCGGCGG TGCGCACCGC GTGATCGACG TACACGAAGC CGGTGCGGCG CAGCGTGCGG ACGACGCGAA GCGGACCGGT GACGCGCGCA TGCTTCGCGC GAACGGCAAG ACCGAGGCGG CGCAAGCTTC CGTGACGGCG AGCGCGGCCG CCGATGCGCC GGCCGCGCCC GCCCCGGCGG CTGCCGCCAG CGGCGCGAAC GCGATACGGA TACAGGCGCG AACGCCACCG ACCGCCGGCC CGTCCGCCGG CGCGATCGAC GGCCCGATCG ATGCGGCAAG CGCAACCGGC GCGACGAGCA CGGCCCGCCC GGCAAACGGG CGCGACACGA CGGTCGAATC GAACCCAACG CATTCGCCGA GCTAA
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Protein sequence | MRVSIPSLPS LAPRALAAAA AIAFAGALAG CALFAPSDAP PAMPSPAHYG ATPLPERTAA AQGLAQRFDV GAQPVPDWWK RYRSPALDAL VDEGLRNSPT LAAAEKSLSA AREQLRAQIG SSLLPTIDAG GQATRERALG MPAFGPQTVL YNVFAGQLQA SYTLDLFGAA RFANRALSKR VDVNAYQLES ARRALAANIV TAAVTSAALA EQVATTERLV ALAREQASDA AARHRLGAAS RTDMLNTRQS AAALEASLPA LRQQAQSARH ALAVLLGRTP DAAPANLALA DLHLPQDVPV VVPSTLLQAR PDIRAAEAGL QAAAAEVGVA TAQMFPQLSL SASMGHAGFK WPAMLSGAGA IWSVGASLTQ PLFHGGALLA QRRAARASYD AAVDQYKQTV LAAFQDVADK LAALENDASA LDASNRSAVA ARGAFDDTAA RVRLGALPPS AARASEQQYR NARLDEIRAT GTRLVDTARL FQAMGTPIDG GPDARRVGGM SGSNDVSDVS GSSGVGGAHR VIDVHEAGAA QRADDAKRTG DARMLRANGK TEAAQASVTA SAAADAPAAP APAAAASGAN AIRIQARTPP TAGPSAGAID GPIDAASATG ATSTARPANG RDTTVESNPT HSPS
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