Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2264 |
Symbol | |
ID | 3691441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2529419 |
End bp | 2531848 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637728720 |
Product | mechanosensitive ion channel family protein |
Protein accession | YP_333659 |
Protein GI | 76810838 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGTC TTGCGACATT CGCGCGCCGC GTCGCGCTGA TAGGCCTATT GCATCTGCTC TGCGCGGCGT TGCCCGCGGC GGCGGCCGAC CTCGCGTCCG GCGCGAGCGT GCCGCCCGCG CCGGCGATCT CGCGTGACGA GGCGCTCGCC GAACTGAAGC GCGTGCAGGC CGCGCTCGAC CGGATCAAGC AGCAGGCGTC GGCCGCGACC ACCTACAAGC AACTGGACGC GCTCGACGAA TCGACGCAAG CGCTGAGCGC CGACGTCGAC AAGCTGACGG CGGCGCTCGT GCCCACGCGC GCGCAGCTTC AGGCGCAGCT CGACGTGCTC GGACCGCCGC CCGCGCCGGG CGCGGCGCCC GAAACGCCCG CCGTCGCGCG GCAGCGCGCG GACCTGAACG CGCGCAAGAC GCAGCTCGAC GCCGCGCTCA AGCAGGCCGC CGACGAGAAG GAAAGCCTCG CGAACCTGAC ACAGCAATAC TCGAAGCTGC GCCGCAGCCT GCTGCGCGAC CAGCTCGTGC TGCGCTCGAG CAGCATTCTC GGCCCGCGGT TCTGGGCCCC GCTCTTTCGT CCGTCGGACG ATGATCGGCA GGAACTCGGC GCGTTCAGCG CGCAGATCGG GCAAGTGCTT GCCGCGGCAT GGGAGCCGGG CCGCCGGCTC GGCACCGCGC TGCTGCTCGC CGCCGCGCTC GCCGTGTGGA CGCTCGGCAG GCGGCTCGCC GAGCGCGCGC TCGCGTGGTT CAGCCTGACG AAGCTGCCGG AGACGCGCGT GCGGCGCAGC GCGCTCGCGA CGTCGATCGC GCTGTCGAGC GTCGTGACGA CGGGCATCGC CGTGCAATTC GTCTATCTCG CGCTCACGCG CGACTACGCG CTGTCGAGCG CGCTGCAGGA TTTCGCCGAC GAGCTCGCGA AGCTCGCGCT GACTTGCGCG CTGATCGCGG GGCTCGGGCG CGCGCTGCTG TGCACCCACC ATCCGAGCTG GCGGCTGCCC GCGCTTGCCG ACGAAGTCGC GCTCGCGATG CGGCCGTTCC CGGCGATCCT CGCGGCGCTG CTGCTCGTCG CGGGCGCGCT AGAGGAACTG AACCGAACCG CCGACACGAG CCTGCAGGTC ACGCTGTTCG GGCGCGGAAT CGTGTCGCTC GTCGTCGTCG TGACGATCGG CGCGTCGCTG CTGCGCGCGA ACCGCGCGCG CACCGCGCTC GCCGCCGCGG GCGAGCCGCC CGAGGCGCGC TCGACGCTCG CGGGGCTGAT CCACGCGGGC GTCACGCTGA CCGTCGTCGC GGCGCTCGCC GCGCTCCTCA TCGGCTACAT CTCGGTCGCG CGCTTTCTCA CCTATGAGCT CGTGTGGTTC GAGATCGTGA TCGGCAGCGT GTACTTGCTG ACGCGCCTCA CCCGCGACGC ATACGCGAGC GCGTTCGCCG CGAACCTGTC GAGCGGCCGG CTGATCAAGC ATCTGTTCGG GCTGAACGAC AGCCACCTCG ATCAGGCACG CACCGTGCTG ACCGGAATCA GCACGAGCGT GCTGCTGCTC GTCGCCGTCA TCGCGCTGCT GACGGGCGGC TTCGGCACGA CGCCGAACGA TCTGCTCGTG AGCGTGATCT CGATGTTCGG CGGCGACAAA CTGCAACGCC TGAACATCGT GCCCGCCCGC ATCCTGAACG CGGCGCTCGC GCTCGCGATC GGCATCTATC TGCTGCGCTC GGTGCGCCGC TGGCTGGACA ACGAGCTGCT GCCGGCGATC GGTCTGGATC AGGGCATGCG CGCGTCGCTC GTCACGCTGT TCAGCAATCT CGGCTATGTC GCGCTCGTGC TGCTCGCGCT GTCGCTGCTC GGCGTCAAAT GGGACAACCT CGCGTGGATC GTGAGCGCGC TGTCGGTGGG CATCGGCTTC GGCCTGCAGG AGATCGTGAA GAACTTCGTG TCCGGGCTGA TCCTGCTCAC CGAGCGGCCC GTGAAGGTCG GCGACATGAT CAGCATCTCG GGCGTCGAAG GCGACATCCG CCGGATCAAC GTGCGCGCGA CCGAGATCCA GCTGTCCGAC CGCTCGACGG TGATCGTGCC GAACTCGCAA TTGATCTCGC AGAACCTGCG TAACGTGACG ATGGGCAACA GCACGCAGGG CGTCGCGACG CTGATGCTCA CGTTTCCGCT CAACACCGAT CCCGAGCAGG TGCGCGATCT GCTGCTCGAC GCATACCGCG AGCACGCGTC GGTGCTCGAG AAGCCCGCGC CGTCCGTCAC CTTCAGCCAG CTGACGCCGG ACGGGATCAC GCTCAGCGTG ACGGGGTACG TCGGCAGCCC GCGGATCGCG GCGGCGACGA AGAGCGACCT GCTGTTCGAG ATTCTCAAGC GACTGCGCGC GGCGGGCATC GCGCTGTCGA ATCCGCAGAC GCTGATGGTG CAGAATCTGC CGCCGCCTTC GAGCGAGTGA
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Protein sequence | MIRLATFARR VALIGLLHLL CAALPAAAAD LASGASVPPA PAISRDEALA ELKRVQAALD RIKQQASAAT TYKQLDALDE STQALSADVD KLTAALVPTR AQLQAQLDVL GPPPAPGAAP ETPAVARQRA DLNARKTQLD AALKQAADEK ESLANLTQQY SKLRRSLLRD QLVLRSSSIL GPRFWAPLFR PSDDDRQELG AFSAQIGQVL AAAWEPGRRL GTALLLAAAL AVWTLGRRLA ERALAWFSLT KLPETRVRRS ALATSIALSS VVTTGIAVQF VYLALTRDYA LSSALQDFAD ELAKLALTCA LIAGLGRALL CTHHPSWRLP ALADEVALAM RPFPAILAAL LLVAGALEEL NRTADTSLQV TLFGRGIVSL VVVVTIGASL LRANRARTAL AAAGEPPEAR STLAGLIHAG VTLTVVAALA ALLIGYISVA RFLTYELVWF EIVIGSVYLL TRLTRDAYAS AFAANLSSGR LIKHLFGLND SHLDQARTVL TGISTSVLLL VAVIALLTGG FGTTPNDLLV SVISMFGGDK LQRLNIVPAR ILNAALALAI GIYLLRSVRR WLDNELLPAI GLDQGMRASL VTLFSNLGYV ALVLLALSLL GVKWDNLAWI VSALSVGIGF GLQEIVKNFV SGLILLTERP VKVGDMISIS GVEGDIRRIN VRATEIQLSD RSTVIVPNSQ LISQNLRNVT MGNSTQGVAT LMLTFPLNTD PEQVRDLLLD AYREHASVLE KPAPSVTFSQ LTPDGITLSV TGYVGSPRIA AATKSDLLFE ILKRLRAAGI ALSNPQTLMV QNLPPPSSE
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