| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2257 |
|---|
| Symbol | |
|---|
| ID | 3691898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2522057 |
|---|
| End bp | 2524300 |
|---|
| Gene Length | 2244 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637728712 |
|---|
| Product | putative copper-related ABC transport system, ATP-binding protein |
|---|
| Protein accession | YP_333651 |
|---|
| Protein GI | 76809073 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCAG CGCGCGCCGC CCGACGACGC ACGCGAATCG GCGCCACCCG GCCGAACCCG
ACCACACGAC CCGACAACGA CGATGCCGAT CCCCCACGCC CTCGCGACGC TCGCCGCGGC
CGCGCTGCTG ATGCACGCCG CGTGCGCGGC GACGCTTGCC GTCCACCCGG GCGAGCGCAT
CGGCGCGGCG CTCGCCGCCG CGCGGCCGGG CGACACGGTG CTCGTCCAGC ACGGCCGCTA
CGAGGAGAAC CTGAGAATCG ACAAGCCGCT CACGCTGCGC GGCGTCGGCC GCCCGACGAT
CGACGGGCGC CTCGCGGGCG ACGTGATCCG CGTCGCCGCG CCGGACGTGA CGATCAGCGG
CTTTTCGATC GTCGACAGCG GCGCGAGCCT CACCGCGCAA AACGCGGGCG TCTACGTGGC
GCCCGGCTCC GATCGCACGC GAATCGAGCG CTGCGAGCTC GTCTACAACC TGTTCGGCCT
CTGGATCGAG CGCTCGGCCG ACGTGCGCGT CACCGGCAAC GTGATCGTCG GCAAGCGCGA
TTTGCTGTCG CCCAGGCGCG GCAACGGCAT CCAGCTCTAC AACACGACGG GCGCGCGCAT
CGCCGGCAAC ACGATCAGCT ACACGCGCGA CGGCATCTAT GTCGACGTGT CGCATCACGC
GCGCTTCGAG CACAACACGA TCCACGACGT GCGCTACGGC ACGCATTACA TGAACTCGTA
CTACAACGTC TGGGACGGCA ACGACGTCTA TCACAACCGC GGCGGCCTCG CGATCATGGA
GGCGCGCGAC CAGATCGTGC GCGGCAACCG GGTATGGGGC AACACCGATC ACGGCATCAT
GCTGCGCACG ATCCAGGATT CGCTGATCGA GAACAACGTC GTCGCCGGCA ACCAGCGCGG
CCTGTTCATC TACGACGCCG AATACAACAC GATCCGCGGC AACCTCGTCG TCGACAACAA
GATCGGCGTG CATCTGTGGG GCGGCTCGAT CCACAACGAC GTGACGGGCA ACGATTTCGC
GGACAACCGC GAGCAGATCC GCTACGTCGC GGCGAGCGAC GTCGCGTGGC CCGGCAACTA
CTGGAGCAAC TACCTCGGCT GGGACCGGCG CGGCCGCGGC GTCGGCGACG TGCCGTACAA
GGCGAACGAT CTCGTCGACC GGCTGACCTG GCGCGTGCCG TCGGTCAAGG TGCTGATGAA
CAGTCCGGCC GTGCAGGCGC TGCGCGTCGT CGCGCGGCAG TTTCCGCTGC TCGCGGTGCC
GAGCGTCGTC GACGACGCGC CGCGCATGCG CGCCGCGCAC GCCGGCTGGC TGCAATGGGT
GGGCAAGCGA TGATCGAGCT CACAGGCGTC GTCAAGACCT TCGGGCCGGT GCGCGCGGTC
GACGGCATCG ATCTCGCGAT CGCGCCGGGC GAGCTGTTCG GCCTCATCGG CCGCAACGGC
GCGGGCAAGA GCACACTGTT CCAGTTGATG CTCGGCCTTC TCGCCGCCGA CGCGGGCAAC
GTGCGCATCG ACGGCGTATC GGCCCGCGAC CCGCGGTTTC GCGCCGTGCG GCGCACGCTC
GGCTATCTGC CGGAAAACGT CGTGCTCTAC GACAACCTGA CGGGGCTCGA GACGCTGCGC
TTCTTCGCAC GCCTGAAAGG CGTCGACGCG GCCGCGTGCG CGCCGCTCCT CGACGAGGTG
GGCCTGGATC ACGCGGCCGC GCGCAAGGTC CGCGGCTACT CGAAGGGCAT GAAGCAGCGG
CTCGGCTTCG CGCAGGCGCT GCTCGGCGCG CCGCGCCTGC TGTTTCTCGA CGAGCCGACG
AACGGGCTCG ATCCCGCCGG CATCCGCGCG TTCTACCGCA TCCTGCACGA GCGCCGGCGC
GCGGGCACGA CGATCGTCAT CACGTCGCAC ATCCTCGCCG AGATCCAGCA GCGCGTCGAT
CGCCTCGCGA TCGTGCGCGC GGGCCGGCTG CAGGCGGTGG GCAGCGTCGA CGCGCTGCGC
GGCGAGACGA ACCTGCCGCT CACGATCGAG CTCGTCGTGC CCGACGACGA CACGCGCGAG
ATCGAGGCCG CGCTGCGCCG CGCGCCGTTC GGCGAGCCGA CGATGCGCGA CCGGCGCATC
GCGTTCGCGT GCCCGCGCGA CGCGAAGATG GCGGCGCTCG CCGCGCTGGC GCCGCTCGGC
GCGCGCATCG TCGACCTGCG CATTCACGAG CCGTCGCTCG AAGACATGTT TCTCGGCTAT
GCCGGCTGCG AGGCGAACGC ATGA
|
|---|
| Protein sequence | MPAARAARRR TRIGATRPNP TTRPDNDDAD PPRPRDARRG RAADARRVRG DACRPPGRAH
RRGARRRAAG RHGARPARPL RGEPENRQAA HAARRRPPDD RRAPRGRRDP RRRAGRDDQR
LFDRRQRREP HRAKRGRLRG ARLRSHANRA LRARLQPVRP LDRALGRRAR HRQRDRRQAR
FAVAQARQRH PALQHDGRAH RRQHDQLHAR RHLCRRVASR ALRAQHDPRR ALRHALHELV
LQRLGRQRRL SQPRRPRDHG GARPDRARQP GMGQHRSRHH AAHDPGFADR EQRRRRQPAR
PVHLRRRIQH DPRQPRRRQQ DRRASVGRLD PQRRDGQRFR GQPRADPLRR GERRRVARQL
LEQLPRLGPA RPRRRRRAVQ GERSRRPADL ARAVGQGADE QSGRAGAARR RAAVSAARGA
ERRRRRAAHA RRARRLAAMG GQAMIELTGV VKTFGPVRAV DGIDLAIAPG ELFGLIGRNG
AGKSTLFQLM LGLLAADAGN VRIDGVSARD PRFRAVRRTL GYLPENVVLY DNLTGLETLR
FFARLKGVDA AACAPLLDEV GLDHAAARKV RGYSKGMKQR LGFAQALLGA PRLLFLDEPT
NGLDPAGIRA FYRILHERRR AGTTIVITSH ILAEIQQRVD RLAIVRAGRL QAVGSVDALR
GETNLPLTIE LVVPDDDTRE IEAALRRAPF GEPTMRDRRI AFACPRDAKM AALAALAPLG
ARIVDLRIHE PSLEDMFLGY AGCEANA
|
|---|
| |