Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2232 |
Symbol | ecpD |
ID | 3689961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2497563 |
End bp | 2498333 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637728688 |
Product | fimbrial chaperone protein |
Protein accession | YP_333627 |
Protein GI | 76811952 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0389823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGC CTACCGTTTG TCATGCCGCT TTTACCGCCG TCCTCGCCCT GTGCGGCACC GCAGCCCACG CGGGTATCCA GGTAGGCGGC ACACGCGTGG TTTTCGACGC GAAAGTCGAT GTGCGCGATG CATCGGTTGC CGTGCGCAAC AAGGGCGAGA CGCCGTACGT GATCCAGATT TTCGTCGACG ACGGCAACGG CAATACCCGC CGCATGCCGT TTGCAGTGAC GCCGCCGCTT TTTCGGCTGG ACGGCGGCAA GGAACAGCGC GTCAGCGTGC GTTACGTGAA GCGAGGCGCG GGGTTGCCGC AGGACGTCGA ATCCGTTTAT TGGCTCAACG TCAAGGAGAT TCCGCCCACC GAGAAGCGCA ACGCGGACAT CAACACGCTC AAGATCGCCG TCCTCACGCG CATCAAGCTC TTTTACCGGC CGGCGGGCCT CGCCGGCAGC GCGGCCGACG CGCCGTCGCG GCTCAAATGG TCCGTCGTGC CGAACCCGAT CGGGCAAGGC GTGGCGCTGA AGGTGAGCAA CCCGAGCGCG TACCACGTGA CCTTTTCGAC GATCGAGATT CAGGCCGCGC AGAACGCGAG CGTCAACGCC GACATGGTGA ATCCGAAAGG CGAACTGATC GTTCCCATTC CGCCGAAGGC CGTCTCGCAG GTCGGCCCCG TCAAATTCAG CTATACCACC ATCAACGATT ACGGCGCCGT CACGCCGGCG ACGGAAGTGA CGGCCCAACC GGCCGGTACG CCCGAGGCCG CGCCGCAGTA G
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Protein sequence | MRLPTVCHAA FTAVLALCGT AAHAGIQVGG TRVVFDAKVD VRDASVAVRN KGETPYVIQI FVDDGNGNTR RMPFAVTPPL FRLDGGKEQR VSVRYVKRGA GLPQDVESVY WLNVKEIPPT EKRNADINTL KIAVLTRIKL FYRPAGLAGS AADAPSRLKW SVVPNPIGQG VALKVSNPSA YHVTFSTIEI QAAQNASVNA DMVNPKGELI VPIPPKAVSQ VGPVKFSYTT INDYGAVTPA TEVTAQPAGT PEAAPQ
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