| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2230 |
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| Symbol | mrkD |
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| ID | 3688222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2494042 |
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| End bp | 2495013 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637728686 |
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| Product | type-1 fimbrial protein, A subunit |
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| Protein accession | YP_333625 |
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| Protein GI | 76809781 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA AACGCGAACG GCGTGCGCGG CGCTCCCGCC TGCCCGCGGC GGCAGGCGGC
CTGTGGCTTG TCGTTGCCGC GCTGCCGCCC GGCGCACGGG CAGCGACTTG CGAAGGCGAC
AAGACACTCG TCACGCTTCC GGCCATCGCG GTCGCGGCCG ACGCGCCGGT GGGAACGGTG
CTGTGGCGTC AGAAGGGGAT CGCTTTCAGC ACCTATTGCA CGTTGGGATG GTTCGACACC
AGCAACATTT ATGTCTGGCG CGCCGACCTG CGCTCGGCGC TGCAGCCATA TGGGCTGACG
TTCTGGCTGA CTTACGGAGG GCAGGGCGGC AACACCGCGC TGCAAATCAA GGAGCCGATG
GTCGTCGATC TCGGCGGAAA GGCCGGTTAT GCGAGCGGCT CCGTCGACCT GGAACTGAGG
AAGACGGGCG TGACGCCGGC GCAAGGCGTC GTCGGCGCGG CGGACATCCC CGCGTTCTAT
CTCGATAGCA ATACGAACTA CAACAAAGGC TCGCACTACA TCCGCGGGCT GACCAACATT
TCGTTCGTCT CCTATACCTG CGACATCGAT ACGGGGTCGC GCAGCATGAA CGTGCCGCTC
GGCGACGTGC GCGTCGATCG CTTCAGCGGC ATCGGCTCCA CCTTCGCGGA TCGGAATTTC
AGCATCGGCA TGACGTGCAC GCAGCCGGCC GGCACGTACG ATATCGCGCT GACGTTTTCC
GCGACGGCGG ACAGCTCCGG CGCACCGGGC GTGCTCGCGA TCACGCAGGG GGCGTCTTCC
GCGTCCGGAG TCGGCATTCA GTTGCTGATG AACGGCTCGC CGGTGACTTT CGGCGCCGTC
CTCGACGCGG GCAGCGCGAC CGCGGGCGCG ACGCTGACGA TCCCGATGAC GGCACGCTAT
TATCAGACCG GCAGTGTCGT GACGCCGGGC GCGGCGAACG GGATCGCAAC ATTCGCCGTC
AGCTACAAAT GA
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| Protein sequence | MRLKRERRAR RSRLPAAAGG LWLVVAALPP GARAATCEGD KTLVTLPAIA VAADAPVGTV
LWRQKGIAFS TYCTLGWFDT SNIYVWRADL RSALQPYGLT FWLTYGGQGG NTALQIKEPM
VVDLGGKAGY ASGSVDLELR KTGVTPAQGV VGAADIPAFY LDSNTNYNKG SHYIRGLTNI
SFVSYTCDID TGSRSMNVPL GDVRVDRFSG IGSTFADRNF SIGMTCTQPA GTYDIALTFS
ATADSSGAPG VLAITQGASS ASGVGIQLLM NGSPVTFGAV LDAGSATAGA TLTIPMTARY
YQTGSVVTPG AANGIATFAV SYK
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