| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2203 |
|---|
| Symbol | ompA |
|---|
| ID | 3690870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2460495 |
|---|
| End bp | 2461367 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637728659 |
|---|
| Product | ompA family protein |
|---|
| Protein accession | YP_333598 |
|---|
| Protein GI | 76812099 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.505527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTA CTAACGTGTT TGGCGGGATA TTCGTAGGTA TGCTGAGCGT TGCGCTGCTA
GGTTGCGCCA GCGTGGAAAA GCCGGCGGCC TACGGTGAGC CGAGCCCAAT GTTCATTTTC
GCGAGCAATG AGGGTTTCGT TGCGCCGTCA AAGATGGCGT TTCCGCAAGG TATTCCGATC
GATCCGGATG CGCTAAAGAA ACTGCAGTTG GGGATGAGTA AAGATCAGGT TCGCGATGCA
TTGGGAGACC GGCAGTACAA CGGAGAGGAT CTCCCGATCT GGCATCGCTG GGACTATCTT
TTCCAGCTCC GTGCTCCTGA CGGTGCGGTG CATCAGTGTC AATACCAGGT GCGCTTCTTG
GGGGGGCTCG CCTATCGCGG CTATTGGGCG GACTCGGCGT GTCGGGACAT CGCCGCGCGC
TATGCGGATG CAGCCGGGCT GGGCGTGATC GCCGTCGCGC CATGCAACCC TTCGGACGTC
GCGGCGCCGC TGCCAGAGCG GGTCGAACTG CCGACGGACA CACTGTTCGC GTTCGACAAG
GGGGGATTCG AGGATATCTC GGCCGATGGC CGCAGGCAAC TTGGCGATCT GGTCGCGTCG
ATCAAGGCGA AGATCCTCTC GATCAATCAC TTGGTCGTGA CGGGCTACAC AGATCGGCTT
GGCAGCGACG AGCACAACGC CCGATTGTCC AGCGAGCGCG CACGCACGGT CGCGGACTAC
ATGATCGCGG AAGGGATTCC TGCTGCGAAG ATTACGGCCG TTGGAAGGGG CGCGGCCGAT
CCAGTGGTCG TCTGCAACAA CGGCGAACAG CCTGAACTCA TCCGTTGCCT GCAAAAGAAC
CGGCGCGTGG AAATCCGCAT CAAGCAAAAG TGA
|
|---|
| Protein sequence | MNSTNVFGGI FVGMLSVALL GCASVEKPAA YGEPSPMFIF ASNEGFVAPS KMAFPQGIPI
DPDALKKLQL GMSKDQVRDA LGDRQYNGED LPIWHRWDYL FQLRAPDGAV HQCQYQVRFL
GGLAYRGYWA DSACRDIAAR YADAAGLGVI AVAPCNPSDV AAPLPERVEL PTDTLFAFDK
GGFEDISADG RRQLGDLVAS IKAKILSINH LVVTGYTDRL GSDEHNARLS SERARTVADY
MIAEGIPAAK ITAVGRGAAD PVVVCNNGEQ PELIRCLQKN RRVEIRIKQK
|
|---|
| |