| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2195 |
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| Symbol | |
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| ID | 3691475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2444512 |
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| End bp | 2445927 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637728651 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_333590 |
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| Protein GI | 76810044 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.560959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGA AGCTCATTGC GGCGATCTTC AGGCCGTTTC TGTCGCTGGC CGATGCGGTG
CTCGGCTACT TCGAGCGCCA CGCCTTCGAA CCGGCGTCGC CCGAGGGGCG GCAATCCTGG
CGCGGCAGCG CGTTGGGGCT CGAGGAGGCG TCCATTGCAC CGGCGCGGCG TGCCGCCGCG
CTGATCCCGA CGGTCATGCT CGCGCTGCTG ATCGTGCTCG TTCTGTGGGC CACGTTCTTC
AAGATCGACA TCATTGCGGC GGGCCAGGGC AAGGTCATTC CTTCCACGAC GGTTCAGCAA
CTCTCGACGC TGGAGGGCGG CATCGTGCGG GAGTTGCTCG TGCGTGAAGG GCAGATCGTC
AAGAAGGGGC AGCCGCTCGT TCGACTCGAT CCGGTCGTGG CGCAGGGCGC CGTGACCGAG
CAGGCCGCCA CGCGAGAGGG ATTGATGGCC TCGATTGCGA GATTGCAGGC TGAAGCCGAC
GGCAAGGCAA CGCCTTTGTA TCCCGCCGGC CTGAAGCCGG AAATCGTGAG CGAGGAGGAG
CACGTGCGGG CGCAACGGGC GGAGGCGCTG AATTCCACCA TCGAGGTGCT GCAGCAGCAG
CGCGCCGCCA AGCAGGCGGA GGCGGCCGAC TACCGCGGCC GGATTCCGCA GTACGTGAAC
AATCAGCATC TGTTGGATGA TCAGATCCAG CGCATGTTGC CGCTGGTCGG AGTGGGGTCC
GTGGCGCCAA ACGAGATCAC CAATCTCCAA CGCGAGCGCG GCAATCTGGC CGCGCAGATC
ATCACGACAC GCGAAGGCGC GGCACAGGCG TCCGCGCAGA TTGCCGAAGC GAGCCACAAA
ATCGAGGAAA AGATCTCCAC CTTCCGCAGC GAGGCGCGGG AAGAGCTGGC CAGAAAGCAG
GTCCAGCTGC AGGCGCTGGA GGGCACGCTG TCCGGCAAGC AGGACATCCT CGACCGGACG
TTGATCCGCT CCCCCGTGAA CGGCATCGTG AAGACGCTTT ACATCACAAC GATTGGCGGT
GTGGCATCGC CGGGCAAGAG CGTGATCGAC ATCGTTCCGA CCAACGATTC GCTGCTGATC
GAGGCTCGCA TCCAGCCGCA GGACATTGCC TATATCAGGG TGGGAGATGA CGCCAAAGTC
AGGATTACGG CGTTCGACTC CGGTGCGCTG GGTTCGCTGG ATGCGAAGGT CGAACTGATC
AGCCCGGACA GTCAGGCCGA CGAGCGCAGT GGGAGCCTCT ACTACAAGGT TCAGGTTCGC
ACGCACAGCA GCGTGGTGGC CACGCAGGTC GGCGACCTGA ACATCTTGCC GGGGATGGTG
GCCGACGTCG ATGTGATCAC CGGGCGTCGG ACCATCATGT CCTATATTCT GCGGCCGATC
GTACGCGGGA TGAGTCGCGC GATGAGCGAG CGTTGA
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| Protein sequence | MSMKLIAAIF RPFLSLADAV LGYFERHAFE PASPEGRQSW RGSALGLEEA SIAPARRAAA
LIPTVMLALL IVLVLWATFF KIDIIAAGQG KVIPSTTVQQ LSTLEGGIVR ELLVREGQIV
KKGQPLVRLD PVVAQGAVTE QAATREGLMA SIARLQAEAD GKATPLYPAG LKPEIVSEEE
HVRAQRAEAL NSTIEVLQQQ RAAKQAEAAD YRGRIPQYVN NQHLLDDQIQ RMLPLVGVGS
VAPNEITNLQ RERGNLAAQI ITTREGAAQA SAQIAEASHK IEEKISTFRS EAREELARKQ
VQLQALEGTL SGKQDILDRT LIRSPVNGIV KTLYITTIGG VASPGKSVID IVPTNDSLLI
EARIQPQDIA YIRVGDDAKV RITAFDSGAL GSLDAKVELI SPDSQADERS GSLYYKVQVR
THSSVVATQV GDLNILPGMV ADVDVITGRR TIMSYILRPI VRGMSRAMSE R
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