Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2186 |
Symbol | |
ID | 3691162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2426561 |
End bp | 2427883 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637728642 |
Product | major facilitator family transporter |
Protein accession | YP_333581 |
Protein GI | 76808609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCAAT CCGCAGTTCC CCTCGACACG GGCACGGCCG TGTCGCCCCC TACGTCGAGC GCCGGGCGAG CAATCGCCGC GGCGTCGATC GGCAACGCGC TCGAGTGGTA CGACTTTTCC GTCTATGCAT TCTTCGCCGT CTACATCGCG CGGAACTTCT TCCATCGAGG CAACACCGGC ACCGAGCTGG TCGAGGCTTT CATGGCGTTC GGCATCGGCT TCATCGCACG GCCGCTCGGC GCGCTCGCGA TCGGCGTATA CGGCGACCGC GCGGGCCGCA AGGCCGCGCT CACGCTGACC ATCCTCGTGA TGGCAACCGG CACGGGCGTC ATCGCGTTCG CGCCGCCATA CGCCGCGATC GGCGTGGGCG CGCCGCTGCT GATCCTCTGC GGGAGGCTAC TGCAGGGCTT CTCGGCGGGC GGCGAAGTGG GCGGCGCGGC GGCGTTTCTC ATCGAGCACG CGCCGGCGGA CCGCAAGGGC TGCTACGCGT CGTGTCTGCA GGCGAGCATG GCCGCGTCGA ACATCCTCGG CGCGCTGGTC GCGACCGGCG TGACGCTTAC GCTGACGCGC GAACAGATCG GCGATTGGGG ATGGCGGATT CCGTTCATCC TCGGCCTCGC GATCGCGCCG GTCGGCCTCT GGCTGCGCAG GACGCTCGAC GAGACGCCGC ACTTCCGCGC CGAGATGGCG CGCGCGCAGC ACGCGCATGC GGAACAGAAA GCGCCGCTTC TGCAGGTGGT GCGCGACCAC CCGCGCGCGC TCGCCGTCGG CACGGGATTC TCGGTGCTCT GGGCCGTGTG CGTCTACGCG CTGGTGATCT ATATGCCGAC GCACGCGCAG CGCGCACTGC ATTTCGACGG GCGCGACGCG TTCATCGCGT CGCTGGTCGG CAACTGCCTG ATGGCCGTCA CCTGCGTGTG CGCGGGAAGC TGGTCCGACC GCCTCGGCCG GCGCACGGTG CTCGCCGCCG GCGCGGCGCT GATGCTCGTG TCGGTCTATC CGCTGCTGCG CTGGCTGAGC GACGTGCACA CGCTCGCCGC GCTCCTTACC GTCCAGAGCG CGTTCTGCGT GTTGGTGGCC ATCTTCACGG GAGTGGCGCC CGCAGCGCTG TCGGAGCTGT TCCCGACCCG CGTACGCGCG ACCGGCATGT CCCTGTCCTA CAACATCGCC ACGACGATCT TCGGCGGCTT CGCGCCCGCG ATCCTCGCAT GGCTCACGCA ACAGACCGGC AATCCGTTTG CGCCGGCCTG GTACGTGATG GTGGCGAGCG CCATCGCGCT CGCATCGATC GCCGCGCTTT CTTCCACGCC ACGCCACGCC TGA
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Protein sequence | MKQSAVPLDT GTAVSPPTSS AGRAIAAASI GNALEWYDFS VYAFFAVYIA RNFFHRGNTG TELVEAFMAF GIGFIARPLG ALAIGVYGDR AGRKAALTLT ILVMATGTGV IAFAPPYAAI GVGAPLLILC GRLLQGFSAG GEVGGAAAFL IEHAPADRKG CYASCLQASM AASNILGALV ATGVTLTLTR EQIGDWGWRI PFILGLAIAP VGLWLRRTLD ETPHFRAEMA RAQHAHAEQK APLLQVVRDH PRALAVGTGF SVLWAVCVYA LVIYMPTHAQ RALHFDGRDA FIASLVGNCL MAVTCVCAGS WSDRLGRRTV LAAGAALMLV SVYPLLRWLS DVHTLAALLT VQSAFCVLVA IFTGVAPAAL SELFPTRVRA TGMSLSYNIA TTIFGGFAPA ILAWLTQQTG NPFAPAWYVM VASAIALASI AALSSTPRHA
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