| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2144 |
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| Symbol | opcP1 |
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| ID | 3691753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2347257 |
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| End bp | 2348516 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637728600 |
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| Product | outer membrane protein |
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| Protein accession | YP_333539 |
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| Protein GI | 76810399 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0977931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC AACGACACAA GACCCTCCGC TCCGGGATGT CGGCTCGCGC GGCCCGGCAG
CTTCCCGGCA ACCGCCGGCT CGCGCGCCTC GCCGGCGCCG CCGCCGCGGC ATGCGCCGCC
GGCTTCGGCG CGAGCACGGC TCACGCGCAA AGCAGCGTCG TGCTGTACGG CCTGATCGAT
ACGTCGATCA CCTACGCGAA CAACCAGCGC ACCCACGGAG CCGGCTCGCC GGGAAGCCCC
GGCTGGGCCG TGACGAGCGG CGCGCTCAAT GCGTCACGCT GGGGATTGCG CGGCCGCGAA
GACCTCGGCG ACGGCGTGTC GGCGATCTTC GCGCTCGAGA ACGGCTTCTC GGGGGCGAGC
GGCGCGCTAT CGCAAAAGGG CGTCGACATG TTCGGCCGGC AGGCATGGAT CGGACTGAAA
TCGAAGGAAG GGGGCGCGCT CACGCTCGGC CGCCAGTACG ACCTCATCCT GGATTTCGTC
ACGCCGCTCG GCGCGTCGGG GCCCGGCTGG GGCGGCAACC TCGCCGTTCA CCCGTACGAC
AACGACGACT CGAACCGCAA CATCCGCATC AACAACGCGG TCAAGTACAC GAGCCCGACA
TACCGCGGAT GGACCCTCGG CGCAATGTAC GGCTTCTCGA ACACGGCGGG CCAGTTCGGC
AACAACGCGG CGTGGAGCGC GGGCCTGTCC TATGCGAACG GCCCGCTGAA ACTCGGCGCC
GGCTATCTGA GAATCAATCG GAATCCGAAC GCCGCGAACG CGAACGGCGC GCTGAGCACG
ACGGACGGCT CGGCGACGAT CACGGGCGGC AGCCAGCAGA TCTGGGCCGT CGCGGGCCGC
TATGCGTTCG GGCCGCATTC GATCGGCGCC GCGTGGTCCC ATTCGGCCAC CGACCGCGTG
AGCGGCGTGC TCCAGGGCGG CAGCATCGCG AAGCTCGACG GCAATTCGCT CGTCTTCGAC
AATTTCACGC TCGACGGGCG CTACGTCGTC ACGCCGAGGT TGAGCCTCGC GGCGGCGTAC
ACGTACACGA TGGGCCGCTT CGACGCGCGC TCGGGCGAAA CCCGTCCGAA GTGGAATCAC
ATGGTCGCGC AAGCCGATTA CGCGTTCTCG ATCCGCACGG ACGCGTATCT CGCGGCCGTC
TATCAGCGCG TGAGCGGCGG CAACGGCATT CCGGCGTTCA ACGCGACGAT CTGGACGCTG
ACGCCGTCCG CGAACGGCAA TCAGGTCGTT GTCGCGCTGG GGCTGCGGCA TCGGTTCTAG
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| Protein sequence | MDNQRHKTLR SGMSARAARQ LPGNRRLARL AGAAAAACAA GFGASTAHAQ SSVVLYGLID
TSITYANNQR THGAGSPGSP GWAVTSGALN ASRWGLRGRE DLGDGVSAIF ALENGFSGAS
GALSQKGVDM FGRQAWIGLK SKEGGALTLG RQYDLILDFV TPLGASGPGW GGNLAVHPYD
NDDSNRNIRI NNAVKYTSPT YRGWTLGAMY GFSNTAGQFG NNAAWSAGLS YANGPLKLGA
GYLRINRNPN AANANGALST TDGSATITGG SQQIWAVAGR YAFGPHSIGA AWSHSATDRV
SGVLQGGSIA KLDGNSLVFD NFTLDGRYVV TPRLSLAAAY TYTMGRFDAR SGETRPKWNH
MVAQADYAFS IRTDAYLAAV YQRVSGGNGI PAFNATIWTL TPSANGNQVV VALGLRHRF
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