| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2124 |
|---|
| Symbol | |
|---|
| ID | 3691402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2323893 |
|---|
| End bp | 2326214 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637728580 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_333519 |
|---|
| Protein GI | 76812008 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0441945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGCA CCCGGCCTCG GCGCGGGCCG CGCGGCTCGT CGCGATCGCC GCGCGCCGGC
TGCTCACGCG CCGCGCCGCT CGTTCTGACG GCGCGTCCAC GCGTGCGCCT GCTCGTCGCG
CACGATCTGC TCGGCGGCGG CGGGCAGCAG ATTGCGGAAC AGCCCGCCGT CGGCCTCGGT
CACGTCGACC ATCTTCTCGA TCATCTCCTG CGGATCGAAC TGCTCGAGCG GGAACGTGAG
CGTCTCGGGC GTCGCCGCGT CGCGCGCCGG GTCGAGCCAG CGGCGCGGCG TCTCCATCAT
CCGGTCGTTG AAGCCCGTGC GGTACGGCCC CGGGTTGACG ACCGCGATCT GGACGCCATG
CGCGGCGAGT TCCAGGTGCA TCGCCTCGGC GATCGCCTCG AGCGCGTGCT TCGACGCGCA
GTACGCGCCC GTGTACGCGC CCGTGATGAG CCCCGCGATC GACGACACGA ACACGATCCT
GCCCCGCCCG CGCGCGATCA TCCCGCGCGC GACCTGCTGC GTGAGCTCGA GCGGGCCGAA
CACGTTGGTC TCGAACAGCT CGCGAACGAT GTCGACGGGC AGATCGACGA GCGCGCCCGC
CTCGCCCGCG CCCGCGTTGT TCAACAGCAC GTCCACGTCC CAGCGCGCGG CCTGCGCGCG
CTCGCGCGCG CACGTCACGT CGAGCTTCAC CGCGTCGAGC GCGAGCCCGC GCCGCGCGGC
CTCGGCGCTC AGCTCGGTGA TCTGCGGGGC GATCTGCACC CCCGCGATCA CGCAATGGCC
CTTCGCGGCG AGCCGCAGCG CGACCTCGCG GCCGAAACCC GAGCCCGCGC CCGTCACCAG
AATGCGTTTA CCCGTCATGT CCTTGCTCCT TGTGCTGCGT TCAGAAGAGT GATGAAAGCG
TCGACGCACA CCTGCGCGAT CGCCGCGTCG TCGTCGACCG TGCCGCCCGA CACGCCGACC
GCGCCCACGC AGCGCCCGTG CGCGTCGACG AGCGGCAGGC CGCCGCCGAA CGTGACGAGC
CCGCCGTTGC TGTGCTCGAT CGAGCGGACC GGCCCGCCCG CGCCCGACAG CGCGCCGAGC
GACGCGCTCG GCATCCGGAA GCGCGCGGCC GTGCCGGCCT TGCGCGTCGC GAGATCGATC
GCGCCGATGA ACGCGTCGTC CATCCGCGCG AACGCGGCGA GATGCGCGCC CGCGTCGACC
ACGGCGATCG CTACGGCCGC GCCCACGGCG CTCAGGCGCG CGGCGTGCGC AACGCCCGCT
TCGACGATGC GCAGCGCGCG CTCGAGCGTG AGTTCGGGGG ACATCGGCGG CTCCTTGTGC
GGTTCGACTG CGAGCCAGTG TAGGGACCGG CGGTATCTGA GAGAATCGGT ATTCCGCTCA
CAAACGTATC AAGTTTTTCT AATGACGATG AAACGCGATC CGCTCGGCGG CCTGCACGTA
TTCATGAGCG TCGTCACGCA CGGCAATTTC ACGCGTGCGG CGGCGGCGCT CGGCTTGACG
CCGGCCGCGG TGAGCCTGGC GATCGGGCAA CTCGAAAGCG AGCTGAAAGT GAAGCTCTTC
AGCCGCAGCA CGCGCGGCGT GAGCCTGACG GAAGCCGGCC AGCGCTATTA CGACGCAACG
GCGCAGCCCT ACCGGCAGGT CGTCGACGCG CGCGACGCGC TGAACGACGC GCGCGACGAA
CCCGAGGGCC TGTTGCGGAT CAGCGCGCTG CACCTCGCGA AATCGGTCGT GACGGCCGAC
GTGCTCGCCG AGTTCTTCCG CCGCTACCCG AAGGTGAGCG TCGAGATCCG CTACGAGGAT
CATCTCGTCG ACATCGTCAA GGAACGCCTC GACGCCGGAA TCCGCCTCGC GGACCGGCTG
CAGTCCGGGA TGGTGGGCGT GAAGATCGCG CCCGCGCTCA CGTGCGCGCT CGTCGCGACG
CCCGGCTATC TCGCGCAGCA CGGCGTGCCG TCGAAGCTCG CCGATCTCGC GCGGCACATG
TGCATCCGCT TTCGCTTTCC GAAGAGCGGC CGCCTGCACA AATGGCCGCT GCGCGACGGC
CGCCGCGACG TCGAGCTCGA CGTCGCCGGC CGCTTCGTCA GCACCGATAC GGGCGCGGTG
ATCGACGCCG CGCGCGCGGG CGCGGGCATC GCGTTCGTGT TCATGCGCGA GCGCATCGAG
GACGACCTGC GCCGCGGCAC GCTGCGCGAG GTGCTGCCGG GCGCGTGCCG GACGCTGCCG
CCGATGTGGC TCTACTACGC GAACCGCAAG CACGTGCCGC CGAAGCTGCG CGCGTTCATC
GCGGTGCTGC GCGAGCACGC GGCGGCCGAC GCGCGGCGCT GA
|
|---|
| Protein sequence | MRRTRPRRGP RGSSRSPRAG CSRAAPLVLT ARPRVRLLVA HDLLGGGGQQ IAEQPAVGLG
HVDHLLDHLL RIELLERERE RLGRRRVARR VEPAARRLHH PVVEARAVRP RVDDRDLDAM
RGEFQVHRLG DRLERVLRRA VRARVRARDE PRDRRHEHDP APPARDHPAR DLLRELERAE
HVGLEQLAND VDGQIDERAR LARARVVQQH VHVPARGLRA LARARHVELH RVEREPAPRG
LGAQLGDLRG DLHPRDHAMA LRGEPQRDLA AETRARARHQ NAFTRHVLAP CAAFRRVMKA
STHTCAIAAS SSTVPPDTPT APTQRPCAST SGRPPPNVTS PPLLCSIERT GPPAPDSAPS
DALGIRKRAA VPALRVARSI APMNASSIRA NAARCAPAST TAIATAAPTA LRRAACATPA
STMRSARSSV SSGDIGGSLC GSTASQCRDR RYLRESVFRS QTYQVFLMTM KRDPLGGLHV
FMSVVTHGNF TRAAAALGLT PAAVSLAIGQ LESELKVKLF SRSTRGVSLT EAGQRYYDAT
AQPYRQVVDA RDALNDARDE PEGLLRISAL HLAKSVVTAD VLAEFFRRYP KVSVEIRYED
HLVDIVKERL DAGIRLADRL QSGMVGVKIA PALTCALVAT PGYLAQHGVP SKLADLARHM
CIRFRFPKSG RLHKWPLRDG RRDVELDVAG RFVSTDTGAV IDAARAGAGI AFVFMRERIE
DDLRRGTLRE VLPGACRTLP PMWLYYANRK HVPPKLRAFI AVLREHAAAD ARR
|
|---|
| |