| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2121 |
|---|
| Symbol | |
|---|
| ID | 3690344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 2320485 |
|---|
| End bp | 2321702 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637728577 |
|---|
| Product | outative extracellular ligand binding protein |
|---|
| Protein accession | YP_333516 |
|---|
| Protein GI | 76810189 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0914412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGATCC ATGCCGAAAG CGATTGGGCA TCCGAACCGA TCGATTCGTT TGAGGCCGCC
CGGCAATCGA AAATCGTGAC GTTTTCTCGA GCGAGGGTCG ACATGAACGT TCGCATGGGG
TGTTTATCGC TGCTGGCCGC CGTCGCATTC GACGCGCACG CGCAATCATC GGTCGTCCGG
ATCGGCGTCG CGATGCCGCT GACGGGGCCC GTCGCCCATC TGGGCAAGGA CGTGCAGAAC
GGCGCGCAAC TCGCCGTCGA CGAGCTGAAC CGCGCGCCGC CGACGATCGA CGGCAAGCCG
GTGAAGTTCG TGCTCGTCGT CGAAGACGAT CAGGGCGATC CACGGCAGGC GGTGCAGGTC
GCGCAGCGCC TCGTCGACGC GCGGGTCGCG GGCGTCGTCG GCGATCTGAA CTCGGGGCCG
ACGATCGTCG CGGCGAAGGT CTACGCGGCG GCCGGCATCG CGCAGATCGC GCCCGCCGCG
ACCCATCCCG CGTACACGCA GCTAGGCTAC AAGACCGCGT TCCGGCTGAT GGCGACCGAC
AACCAGCAAG GCGCGTCGCT CGCCGGGCTC GCCGCGAAGC TCGCGAAAGG CCGGCCGATC
GCGCTGATCG ACGATCGCGG CGCCTACGGC CAGGGCCTCA TCGATCAGAC GGAGAAGACA
CTGCGCGCGA GCGGCGTCAC GCGAATCATC CGCGACTACA CGACGGACAC CGCGGTCAAT
TTCGCGTCGA TTCTCACGCG CGTGAAGGGC GCGCATGCGG CCGTGATCGT CTACGGCGGC
GCCGATGCAC AGGCGGGGCC GATGGTGCGG CAGATGAAGG CGCTCGGAAT CGACGCGGCG
TTCGTCGGCA GCGACGGCGT GTGCACCGGG CAGTGGACGG CGCTGTCGTC GGGCGCGAAC
GAAGGCCAGT TCTGCACGCA AGCAGGCGAC CCGCGCGCGA GGATGGCGGG TTACGCGGCG
TTCGAGCGGC GTTTCGAGGC GCGCTACGGC AAGGTGATCG TGTTCGCGCC GTATGGCTAC
GACGCGGTGA TGCTGCTCGC CGACGCGATG CGGCGCGCGA ATTCGACCGA GCCGGCCGCT
TTGCTCGGCG CGCTCGCGAC GACCCGTTAC GACGGCGTGA TCGGCCGCAT CCGCTTCAGT
CCGCAGGGCG ACAACCTGAA CGGCGCGGTG ACGGTCTACC GCGTGCAGCG CGGCGCGCTC
GTGCCGGTGT CCGACTGA
|
|---|
| Protein sequence | MSIHAESDWA SEPIDSFEAA RQSKIVTFSR ARVDMNVRMG CLSLLAAVAF DAHAQSSVVR
IGVAMPLTGP VAHLGKDVQN GAQLAVDELN RAPPTIDGKP VKFVLVVEDD QGDPRQAVQV
AQRLVDARVA GVVGDLNSGP TIVAAKVYAA AGIAQIAPAA THPAYTQLGY KTAFRLMATD
NQQGASLAGL AAKLAKGRPI ALIDDRGAYG QGLIDQTEKT LRASGVTRII RDYTTDTAVN
FASILTRVKG AHAAVIVYGG ADAQAGPMVR QMKALGIDAA FVGSDGVCTG QWTALSSGAN
EGQFCTQAGD PRARMAGYAA FERRFEARYG KVIVFAPYGY DAVMLLADAM RRANSTEPAA
LLGALATTRY DGVIGRIRFS PQGDNLNGAV TVYRVQRGAL VPVSD
|
|---|
| |