Gene BURPS1710b_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2103 
Symbolint 
ID3691081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2293652 
End bp2295331 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content66% 
IMG OID637728559 
Productphage integrase family protein 
Protein accessionYP_333498 
Protein GI76811922 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGTCG ACGAGACTGA TTCCGGCTTC CCCAGCGAAG CGGAACTCGC CGCATTGCGC 
AGTTGGTACG CGGGCCTTGA CGCACGGGCC GCCGTCGCCC GCTATCTGGG CGACCGAAGA
GCAGCCGGTG TGTCCTCGCG CGGTATGCTC GGCCGGATTC GTCGGCGCCT CGTCGCGTAC
GCGCAGGCGT GCCATCGCGA GGATCTGGCG AGCGTTTTCG TCGATCGCCC GACGACAGTA
TCGGCGAATG GGGTGGCCCT CGCAATCGAG AAGCTGCGCA ATTTGCCGGT GCCCGTACCG
ATGATCGCCG ATCCGGTCGA TCTGTGGTTA CCACCGCGAA TCGTTGCAGC GCTACACGCG
CACGGCATCC GGACGCTGGC CGACCTGACC GTGAGAATTC CGCGACGGCG TCGCTGGTGG
TTGGCCATCG CCGGACTCGG CGTCGCCGGC GCGTGCCGAA TCGAGGCGTT CTTTGCCGCC
CATCCCGCCC TGACCGAACG CGCCCGTGCG TTAATTGCCG CTACGCCGAT AGGCAATATC
GTGCCGTGGG AGCAGTTGCG CGTGCCACAC GAGGTCGACG GCTCGCGCGG ACAGTACCGC
GCCCCGGCGA ATGCCTGCTT GCTCAAGGCT TCGAACGACT ACGAGGCGGT TCATTCCTGG
TTGTCGCTGC ACGAGTCGGT GGCCACGCAA CGCGCTTACC GGAAAGAAGC CGAACGCCTG
ATTCTGTGGG CGATCGTCGA GCGCAACTGC GCACTATCGT CGCTCACCAC TGACGACGCG
ATCGCGTATC GGAGTTTCCT GCGACGGCCG ACACCGCGCG AGCGCTGGGT TGGGCCATCG
CGACCGCGAC ACAGTGTCGA ATGGCGCCCC TTCAACGGCG CGCTATCCCC CCGCTCAGCG
GCGTACGCGC TGAACGTTCT CTCGGCAATG TTTCGCTGGC TGGTCGAGCA ACGGTACGTG
CTTGCGAATC CGTTTGCCGG CATCAAGGTC AAGAGCCACG CACCGCGTGC GGGACTGGAC
GTGTCCCGCG GATTCTCCGA GGGCGAATGG CTGCTGATCC GCACGCTCGC TGACGGCCTC
GAGTGGTCGT ACGGTTGGAG TGCGCCGGCG GCGCAGCGCC TTCGATTCCT GCTGGACTTC
GGCTACGCGA CCGGCCTTCG CGCGAGCGAG CTGGTCGGCG CGAAGCTCGG CGATATTCGT
CGTGACGAGC ACGGCGATCA CTGGCTGCAC GTGCTCGGCA AAGGCGGCAA GCTCGGCAAG
GTGGCCTTGC CGTCGCTGGC CCGAACCGCG CTAGATCAAT ATCTCGTGCA GCGCGGCCTA
CCAGTCACGC CGGAGCGCTG GAATCCGGCG ACGCCGCTCG TCGTGAGTCT CGAGGAAGAT
GGTGCGCGCA TCGAAAGCAC TCGGCTCTGG CGCGTGCTGT GCCGGTTCTT TGTGCTGGCC
GCCGACACGA TTCAGGACGA ACGACCTGCG ACCGCTGAGA AGCTGCGTTG TGCGAGCCCG
CATTGGATGC GGCACACGCA CGCGTCGCAC GCGCTCGCGC GCGGCGCCGA GCTGATCATG
GTGCGGGACA ACTTGAGACA TGCGTCGATT TCAACGACTT CGACCTATCT GCACAGTGAC
GAAGTGCAGC GAGCGCGCCA GTTCGATCAG GCATTTCGTC CACCGGATCT CAAGCGGTAG
 
Protein sequence
MPVDETDSGF PSEAELAALR SWYAGLDARA AVARYLGDRR AAGVSSRGML GRIRRRLVAY 
AQACHREDLA SVFVDRPTTV SANGVALAIE KLRNLPVPVP MIADPVDLWL PPRIVAALHA
HGIRTLADLT VRIPRRRRWW LAIAGLGVAG ACRIEAFFAA HPALTERARA LIAATPIGNI
VPWEQLRVPH EVDGSRGQYR APANACLLKA SNDYEAVHSW LSLHESVATQ RAYRKEAERL
ILWAIVERNC ALSSLTTDDA IAYRSFLRRP TPRERWVGPS RPRHSVEWRP FNGALSPRSA
AYALNVLSAM FRWLVEQRYV LANPFAGIKV KSHAPRAGLD VSRGFSEGEW LLIRTLADGL
EWSYGWSAPA AQRLRFLLDF GYATGLRASE LVGAKLGDIR RDEHGDHWLH VLGKGGKLGK
VALPSLARTA LDQYLVQRGL PVTPERWNPA TPLVVSLEED GARIESTRLW RVLCRFFVLA
ADTIQDERPA TAEKLRCASP HWMRHTHASH ALARGAELIM VRDNLRHASI STTSTYLHSD
EVQRARQFDQ AFRPPDLKR