| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2090 |
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| Symbol | pvdA |
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| ID | 3689226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2275709 |
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| End bp | 2277196 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637728546 |
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| Product | l-ornithine 5-monooxygenase |
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| Protein accession | YP_333485 |
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| Protein GI | 76811630 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3486] Lysine/ornithine N-monooxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0869348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCG CGGTCCGCAT CACGTTTTCG TCCGGCCGGC GCCGTCCGCG CGCCGGCCAC
ACCGTTAAGG GAATCAGAGA CATGCAGAGA GATACCGTAT TCGACCTGAT CGGCGTCGGT
TTCGGGCCGT CGAACCTCGC GCTCGCCGTG CGACTCGCGG AAGCGGGCGA GCCCGCCGCG
TTCGCGCATT GCTACGTCGA GCGCCAGCCG GCGTTCGGCT GGCACCGCGG GATGCTGCTC
GACGACTGCC GGATGCAGAT TTCCTTCCTG AAGGATCTCG TCACGCTGCG CGACCCGAAG
AGCCGCTTCA CGTTCATCAA CTACCTGTAC GAGCACGGGC GCCTGAGCGA GTTCGTGAAC
CTGAAGAATT TCTATCCGAC GCGCGTCGAG TTTCACGATT ACCTGAGCTG GGTCGCGAAC
GCGTTCGACG AGCGCGTCCA TTACGGCGAG ACGGTGACGG CGATCGAGCC CGTCGCGGCG
CCGGGCGCGC CCGGCGAGAT CGACGCGCTG CGCGTGTTCT CGAAGGGCGC CGACGGGCGC
GAGCGGCAGC GCGTCGCGCG CGCGCTGTCG GTGGGCGTCG GCGGCGCGCC GAGCGTGCCG
GATGCGTTCG CCGCGCTCGG GCCCGAGTGC GTCGTCCATT CGTCGAGCTA CCTCACGTCG
ATCGAGCGCC TGGTCGGCGC GCCGGGCGCG CACGCGCGAA AGCGCATCGC GGTGATCGGC
GCCGGGCAGA GCGCGGCCGA GGTGTTCGTC GATCTCGCGC GGCGCTTCCC GCACGTCGAG
GCGAGCCTCG TGATCCGCTC GGGCGCGCTC AAGCCCGCGG ACGACAGCCC GTTCGTCAAC
GAGATCTTCA ATCCGGCGTT CACCGACGTC GTCTACGCGC AGCCGGCGAG CGGCCGGCGC
TCGCTCATCG AGCGCTTTCG CGACACGAAC TACGCGGTCG TCGATCGCCC GCTCATCGAG
CAGATCTACG AGATGCTCTA TCTGCAGCGC GTCGCCGGCG AGGCGCCCGG CGCGCCGCGC
CACCGGCTGC TCGCGAACAC CGCGATCGAA TCCGCCGCGC GCACGGCGCA CGGGCAGGTG
GAGCTCGCGT TGCGCGACCG GCTGACGGGC GACGCGCGCA CCGAGCGCTT CGACGGGCTC
GTGCTCGCGA CGGGCTACCG CCGCGACACG CATCTGCCGC TTCTCGAGGG GCTCGCGCCG
CACTTGGGCG ACGCGCTCGC GGCGGGCGAC GTCGCGCGCG ACTACCGGCT CGCGACGCCC
GCGCACTTCA AGCCGCGGAT CTATCTGCAA GGCTGCTGCG AGGACAGCCA CGGGCTGTCC
GACACGCTGC TGTCGGTGCT CGCGCGGCGC GCGGACGAAA TCGCCGCGTC GCTCGCCGAC
GCAGCCGACA CGACCGAATA CGAAGAAGCC GACCCGGCTG CCGGCCGCGC GCGGCCGCGA
CACGAAAACA ACGGGGTGAG CGACGGCCGG CTGGCCATCG CTCTTTGA
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| Protein sequence | MNGAVRITFS SGRRRPRAGH TVKGIRDMQR DTVFDLIGVG FGPSNLALAV RLAEAGEPAA
FAHCYVERQP AFGWHRGMLL DDCRMQISFL KDLVTLRDPK SRFTFINYLY EHGRLSEFVN
LKNFYPTRVE FHDYLSWVAN AFDERVHYGE TVTAIEPVAA PGAPGEIDAL RVFSKGADGR
ERQRVARALS VGVGGAPSVP DAFAALGPEC VVHSSSYLTS IERLVGAPGA HARKRIAVIG
AGQSAAEVFV DLARRFPHVE ASLVIRSGAL KPADDSPFVN EIFNPAFTDV VYAQPASGRR
SLIERFRDTN YAVVDRPLIE QIYEMLYLQR VAGEAPGAPR HRLLANTAIE SAARTAHGQV
ELALRDRLTG DARTERFDGL VLATGYRRDT HLPLLEGLAP HLGDALAAGD VARDYRLATP
AHFKPRIYLQ GCCEDSHGLS DTLLSVLARR ADEIAASLAD AADTTEYEEA DPAAGRARPR
HENNGVSDGR LAIAL
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