| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2088 |
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| Symbol | |
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| ID | 3690368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2270427 |
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| End bp | 2275646 |
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| Gene Length | 5220 bp |
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| Protein Length | 1739 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637728545 |
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| Product | pyoverdine synthetase D |
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| Protein accession | YP_333484 |
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| Protein GI | 76810174 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.393572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCC CCGATCTGCT GTCGCTCGCC GCGCGTTTCG CGCGGCTGCC CGACACGCAG
CGCAAGCAGT TCCTCGCGAA GCTCGGCGAC GCGGGAATCG ATTTCCGGAT GCTGCCGATT
CCGCCGCGCG AGGACCGCGC GGCGAGCGTG CCGGCATCGT TCGCGCAGAC GCGCCTCTGG
CTGCACGCGC GCCTGCTCGG CGAATCGGCC GCGTACCACA TCACCGAGCG GCTGCGCCTC
GACGGCGGGC TCGACGCGAA CGCGCTGCGG CTGTCGTGCG ACGCGCTGAT CGCGCGCCAC
GAGGCGCTGC GCACGACGTT CGCCGAGGGC GCGGCCGGCG TGCTGCAGAC GGTGCACGCG
CCGATGCGCT GCCCGTGGCG CTTCACCGAT CTCGCGGACG CGAGCACCGG GTCGCGCGAG
CAGCGCGCGG CCGCCATCGC CGAGCGCGAC GAGGCCGAGC CGTTCGATCT CGCGCACGGC
CCGCTCGTGC GCGCGCACCT GATCCGGCTC GATGCGGCCA CGCACTGGTT CGTGCTGACG
ACGCACCACA TCGTGTCGGA CGGCTGGTCG GCCGACGTGA TGCTCGCGGA GCTGTCGTCG
TTCTACCGGT CGTACGCGAC GGGCGACGCG GTGTCGCTCG CGCCGCTGCC GGTGCAGTAC
GCGGACTACG CGCTCTGGCA GCGCCGCTGG CTCGACGCGG GCGAGGGCGA GCGCCAGCTC
GCGTACTGGC GCGCGACGCT CGACGCGAGC CGTGACGCGC TGCTGCTGCC GGGCGCCGCG
ACGCGGCCCG CGCAGCGCGG CGCGAGCGGC GCGCGCCATG CGTTCGACAT ATCCGCCGAA
CTCGCGCGGC GCATGCGTGC GCTGGCGCAG GCGCGCCGGG CGACGCCGTT CGCCGTGCTG
CTCGCCGCGC TCGCGACGCT GCTCGCGCGC GCGAGCGGCG AGACCGGGAT CCGGATCGGC
GTGCCGTCGG CGAATCGCGA GCGCGGCGAG ACCGTCGGGC TGATCGGCTT TTTCGTCAAT
ACGCTGACGC TCGCGGCGAG CACGCCCGCG ACGCTCGCGT TCGACGCGCT CGTCGACGCG
ACGCAGCGCG GCCTGATCGA CGCGCAGTCG CACCAGGACG TGCCGTTCGA TCAGGTGGTC
GACGCGCTCG GCGTCGCGCG CAGCGCGAGC CACCATCCGC TTTTTCAGGT GATGGCCGCC
TACGGCGCGC GGCGCGTGCT GCCGTCGTTC GCCGAGGTGC GCGCGACCGA GCTGCCCTCG
GGCATGCCGT ATGCGAAATT CGATCTCGCG CTCAGCTTCG ACGAGCGCGA CGACGGCGGG
CTCGACGCGC GCTTCGTCTA TGCGACCGAT CTGTTCGACG CCGACGCGAT CGAGCGCTTC
GCCGCGCGCT ACGTCGAGCT GCTCGCGCAC GCGCTCGACA CGCCCGGCGC GGCGATCGGC
GATCTGCAAT GGCTGCCCGA AGCGGAGCGC CGCCAGCTCG CCGCGTGGAA CGGGCAGACG
CACGACTTCA CCGGGCGCGC GTCGCCGGCG CGCGCCGGCG CCGGCGTCTC CGGCGAGCCC
GCCGGCGCGG CGGTGCCCCG CGAACGCGCC GGCCAAGCCG GCGGCGAGCC GTTCGTCCCG
GTCCATGACC GGATTGCGCA GCACGCGCGC CGCCGCCCCG ACGCGCGCGG CGTCGCCGAC
ATCGGGCGCG CGCTCACGCG CGGCGAGGTC GACGCGCGCG CGACGCGGCT CGCGAAGCGC
CTCGTCGCGG CGGGCGTGGG CGCGGAGATG CGCGTGGGCG TCGCGCTGTC GCGCTCGGTC
GATCTGCTCG TCGGGCTGAT CGCCGCGCTC AAGTCGGGCG GCGCGTTCGT GCCGCTCGAT
CCGAGCCACC CGCGCGAGCG CCTCGCGCAG ATGCTGGAGG ACGCGCAGAT CGCGCACGTG
ATCACCGAGC GCGGCAGCGT CGACGCGCTG CCGCTCGCGG GCGCGACGCG CGCGTGGCTT
GTCGACGACG CGATCGCCGA CGCGGAGATC GACGGCGTCG CGCTGCCCGC CGTGTCGCCG
CATCAGGCCG CGTACGTGAT CTACACGTCG GGCTCGACCG GCAAGCCGAA GGGCGTCATC
GTCGATCACG GCGCGTTCGC GCGCCATTGC GAGGCGATCG CCGCGCGCTA CGGCGCGACC
GAGCGCGACG TGTTCATGCT GTTCCAGTCG GTCAATTTCG ACGGCGCGCA CGAAGGCTGG
TTCTCGCAGT ACATGTCGGG CGCGGCCGTC GCGGTGACGG CCGACACGCT GTGGCCGCCC
GCGCGCACCT GCGCGCTCGC CGCGCGCGAA GGCGTGACGA TGACCTACGT GCCGCCCGGC
TGCGCGACGC AGCTCGCCGA ATGGGCGCTC GAGCACGGCG CGCCGCCGTC GCTGCGCTCG
ATCACGGTGG GCGGCGAGGC GACGTCGCGC GAGGCGTTCG CGCTGATGCG CCGCGCGTTT
CCGAACGCGC GCGTCGTCAA CGGCTATGGG CCGACCGAAA CGGTGATCAC GCCGATGCTG
TGGATGTTCG CGCCGGGCGA CGATCCCGCC AAGCTCGCGG ACGCCGCGTA TCTGCCGATC
GGCACGCTCG TCGGCGCGCG CACCGCGCAC GTGCTGGACG CGCGCCTGAA TCCGCTGCCC
GTCGGCGTGA TCGGCGAGTT GTATCTGGGC GGCGAGGGCG TCGGGCTCGC ACGCGGCTAC
CTGGGCCGCG CGGCGCTCAC CGCCGAGCGC TTCGTGCCCG ATCCGTACGG CGCGCCGGGC
GCGCGGCTGT ACCGCACGGG CGACCTCGTG CGCCGCCGCG CCGACGGCGT GTTCGACTTC
ATCGGCCGCA TCGATCACCA GGTGAAGCTG CGCGGCTTGC GCATCGAGCT CGGCGAGATC
GAGGCGCAAC TCGCCGCGCA CGACGACGTG CGCGAGGCGG TGGCGGTCGT GTTCGGCGAG
GGCGCGCACG CGCGGCTCGC CGCGTTCGTC GAGCTCACGG GCGACGCGCG CGCGCGCGCG
CGGCGCGCGG ATGCGGCCGA GCTCGACGCG CATTTGCGCC GCACGCTGCC CGATTACATG
GTGCCCGCGC ACATCGTCGT GCTCGACGCG CTGCCGCGCA ACGCGAACAG CAAGGTCGAC
CGCGCGGCGC TGCCCGAGCC CGCGCACGTC GCGCGCGCGT ACGAGGCGCC CGACGGCGAG
CTCGAGACGG CGCTCGCCGA GATCTGGCGC GAGGTGCTCG GCGTCGAGCG CGTCGGGCGC
GCCGATCATT TCTTCGAGCT GGGCGGCCAT TCGCTCGCGG CGGTGCGGGT GGCCACGCGC
GTCGCCGAGC GGCTTGCGCG CGACGTGCCG GTGCGCGCGC TGTTCGAGGC GCCGATTCTC
GCGCCGTACG CGCAGCGCGT CGCCGCCGCC GCGCCAGCGC ACGCGCCGCA ACGCGCGGGC
AGCGCATCGT ACGCGCCCGA TGCCGACGGC GTGCTGCCGC TGTCGGCCGC GCAGCGCGGC
CTGTGGTTCC TGTGGCGCGC GCAGCCGGAC AGCGCCGCGT ACAACATTCC CGTCGCGCTG
CGGCTGCGCG GCGCGCTCGA CGTCGATGCG CTCGCCGATG CGCTCGCGCA TGCGGCTGTC
CGCCACCCGG CGCTGCGCAC GCGGATCGTC GCGCGGGCGG ACGGCGCGCC GGGGCAGCGG
ATTGCGCCGG CGCGGCGCAT CGAGCTGCCG GTCGTCGACC TGCGCGCCGA CGCGCGCATC
GCGGACGACG ACGCGCGGCT CGCCGCCGCG ATCGCGCTGA CCGACGCCGA CGCGCTCGCG
CCGTTCGATC TCGCCGCCGA CGCGCCGCTC TGGCGCGCGC GCGTGATCCG GCTCGGCGCG
CACGACCACG TGCTGTCGCT CGTCGTCCAT CACATCGTGT CGGACGGGCA ATCGATCGAT
CTGTGGCTCG ACGCGGTGCG CGCGGCGTAC GTCGCGCGGC GCGCGGACGA ACCCGCGACG
GCGGCGGCGC GCGCAGCGGC GGACAGGCGA ACCGACAGGC ACGCGGGCTC GCGGGCGGCG
TCGCTTGCGC CGGCACGCGC GAAGGAAGCG CCCGCGCAAT CGGCGACGAT TGCGCCGATA
CAAGCGCCCG CCGACGCGCA TCAGCCCGCG CCGGACGCAC CGGTGCTGCC GGCCGCCGCG
CCGCACGCGC GGCTCGCGTT CTGGCGCGAG GCGCTCGCCG GCGCGCCGTC GCACGCGCTG
CCGCCGCCGC GCGCGGGCCG CGCGTGCGCG CCGCGCTGGG ACGCGGGCCG TCTCGCGTTC
GAATTCGACG CCGCACTCGT GCGCCGCGCG CGCGCGATGG CGCTCGACGC GCATGCGACG
CTGCCGATGC TGCTGCACGC GGCGCTGAAC GCGGCGTTCT ACCGCGCGAC GGGCGCGACC
GATCAGCCGG TCGGCGTGCT CGCGTCGACC CGCGAACTGA CGGGCGACGC GGCCGAGCGC
GCGCTCGGGC TCTTCATCAA CGCGGTCGTC GTGCGCACGC GGCTGTCGGG CGCCGATACG
CCGGCCACGC TCGTCGCCGC GGTGCGCGAC GCGGCGCTCG CCGCGTATGC GCACGCGGAC
GCGCCGTTCT GCGATGTCGT CGCCGCGCTG CGCGCGCCGC GCACGGTCAA CGGCAATCCG
CTGTTCCAGG TGATGTTCAA CTACCTGCGG CCGGCGGGCG CCGCCGCGCG CGACTGGGCG
GGGCTCGCGG TCGACGCGTT CAACGATGTC CGGCACCGCG TCGTGTTCGA GCTCGAGCTC
GACATCGTCG AGCATCCGGA CGGCCGCGTG ACGGGCGCGT TCTCGTATGC GGCCGAGCGC
GTCGACGGCG CGTTCGTCGC CGCGCTCGCC GCCGACTATC TCGACGTCGT GCGCGGCTTC
GTCGACGCGC CCGCGCGCGC GCTCGGCGCG TGCGCCGCGC GTTTCCCGCT CGCCTCGCAC
GAGGCGTACG CGCCGCCGCC GCCCGCCGCG GCGGACGCGC GCGCCGCCGC GCGCGTAGCG
CGCGCGCTCG CCGAGCTGTG GCGCGCGTCG CTCGGCCATG CCGCGCCCGC GCCCGAGGCC
AACCTGTTCG AAGCGGGCGC GACGTCGTTC GACGTCGTGC GCTTCGTCGA CGCGGCGCGC
TCGGCCGGCT TCGCGCTCGC GATCGCCGAC GTGTTCGCCG CGCCGAGCCT CGCGGCGCTC
GGCGAGCGCG CCGCGCACAC CGCCGGCCAG CCCGCCACGC AGGCGCGCGA TGCCGATTGA
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| Protein sequence | MTPPDLLSLA ARFARLPDTQ RKQFLAKLGD AGIDFRMLPI PPREDRAASV PASFAQTRLW
LHARLLGESA AYHITERLRL DGGLDANALR LSCDALIARH EALRTTFAEG AAGVLQTVHA
PMRCPWRFTD LADASTGSRE QRAAAIAERD EAEPFDLAHG PLVRAHLIRL DAATHWFVLT
THHIVSDGWS ADVMLAELSS FYRSYATGDA VSLAPLPVQY ADYALWQRRW LDAGEGERQL
AYWRATLDAS RDALLLPGAA TRPAQRGASG ARHAFDISAE LARRMRALAQ ARRATPFAVL
LAALATLLAR ASGETGIRIG VPSANRERGE TVGLIGFFVN TLTLAASTPA TLAFDALVDA
TQRGLIDAQS HQDVPFDQVV DALGVARSAS HHPLFQVMAA YGARRVLPSF AEVRATELPS
GMPYAKFDLA LSFDERDDGG LDARFVYATD LFDADAIERF AARYVELLAH ALDTPGAAIG
DLQWLPEAER RQLAAWNGQT HDFTGRASPA RAGAGVSGEP AGAAVPRERA GQAGGEPFVP
VHDRIAQHAR RRPDARGVAD IGRALTRGEV DARATRLAKR LVAAGVGAEM RVGVALSRSV
DLLVGLIAAL KSGGAFVPLD PSHPRERLAQ MLEDAQIAHV ITERGSVDAL PLAGATRAWL
VDDAIADAEI DGVALPAVSP HQAAYVIYTS GSTGKPKGVI VDHGAFARHC EAIAARYGAT
ERDVFMLFQS VNFDGAHEGW FSQYMSGAAV AVTADTLWPP ARTCALAARE GVTMTYVPPG
CATQLAEWAL EHGAPPSLRS ITVGGEATSR EAFALMRRAF PNARVVNGYG PTETVITPML
WMFAPGDDPA KLADAAYLPI GTLVGARTAH VLDARLNPLP VGVIGELYLG GEGVGLARGY
LGRAALTAER FVPDPYGAPG ARLYRTGDLV RRRADGVFDF IGRIDHQVKL RGLRIELGEI
EAQLAAHDDV REAVAVVFGE GAHARLAAFV ELTGDARARA RRADAAELDA HLRRTLPDYM
VPAHIVVLDA LPRNANSKVD RAALPEPAHV ARAYEAPDGE LETALAEIWR EVLGVERVGR
ADHFFELGGH SLAAVRVATR VAERLARDVP VRALFEAPIL APYAQRVAAA APAHAPQRAG
SASYAPDADG VLPLSAAQRG LWFLWRAQPD SAAYNIPVAL RLRGALDVDA LADALAHAAV
RHPALRTRIV ARADGAPGQR IAPARRIELP VVDLRADARI ADDDARLAAA IALTDADALA
PFDLAADAPL WRARVIRLGA HDHVLSLVVH HIVSDGQSID LWLDAVRAAY VARRADEPAT
AAARAAADRR TDRHAGSRAA SLAPARAKEA PAQSATIAPI QAPADAHQPA PDAPVLPAAA
PHARLAFWRE ALAGAPSHAL PPPRAGRACA PRWDAGRLAF EFDAALVRRA RAMALDAHAT
LPMLLHAALN AAFYRATGAT DQPVGVLAST RELTGDAAER ALGLFINAVV VRTRLSGADT
PATLVAAVRD AALAAYAHAD APFCDVVAAL RAPRTVNGNP LFQVMFNYLR PAGAAARDWA
GLAVDAFNDV RHRVVFELEL DIVEHPDGRV TGAFSYAAER VDGAFVAALA ADYLDVVRGF
VDAPARALGA CAARFPLASH EAYAPPPPAA ADARAAARVA RALAELWRAS LGHAAPAPEA
NLFEAGATSF DVVRFVDAAR SAGFALAIAD VFAAPSLAAL GERAAHTAGQ PATQARDAD
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