Gene BURPS1710b_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2076 
SymbolpsbS 
ID3691104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2249783 
End bp2250496 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID637728532 
Productextracytoplasmic-function sigma-70 factor 
Protein accessionYP_333471 
Protein GI76808708 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.370816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAG TGCTCGCTCG GCCGGCGCCG GCAAAACCGT TACCGATCCT CGCTTCGAAC 
GGGGCGTTTG CACCCGCCGC CGCGCCCGTC TTGCGCGCGC CGTCGCGGCC TGCGGCGCGC
ACGCCGGGCG CGCGCGAGCA CGGCGCGCTC GTCGATGTGC TGGTCGCGAA CCGGCCGATG
CTCGTCAAGC TCGCGCGCGG CTTCGTCGGC TGCGCGAGCC GCGCGGAGGA CGTGGTGCAC
GACGTGTTCG TGAAGCTCGT CGATTTTCCG AACCAGGACG CGATCCGGCA GCCCGTCGCG
TACGTGACGC GGATGGTTCG CAACGCGTCG ATCGACGCGT GCCGCCGCCA GACGCTCGAG
AACACCTACC ACGCGGACGA GGACGACGGC CTCGACGTGC CGTCGCCCGA GCTGTCGCCG
GAGGCCGCGC TCGTCGTGCG CGACACGCTG CGCCACGTGT ACGACGCGCT CGCGCAACTG
CCCGCGCGCA GCCGCGCCGC GTTCGAGATG GTGCGGCTGC GCGAGGAGAC GCTGCAGAGC
GCCGCGCGCG CGCTGAACGT GTCGCAGACG CTCGTGCACT TCATGGTCCG CGACGCCGAG
CGGCACTGCG TCGCGTGCGT CGACGCGTCC GAGCGCGGGC TCGCGTGCCC GGCGTTTTGC
GGCGCCCGCG CGCGGACGGT AAAAAAATGC GTGCGCGATT CGTCTATCGA GTAG
 
Protein sequence
MAEVLARPAP AKPLPILASN GAFAPAAAPV LRAPSRPAAR TPGAREHGAL VDVLVANRPM 
LVKLARGFVG CASRAEDVVH DVFVKLVDFP NQDAIRQPVA YVTRMVRNAS IDACRRQTLE
NTYHADEDDG LDVPSPELSP EAALVVRDTL RHVYDALAQL PARSRAAFEM VRLREETLQS
AARALNVSQT LVHFMVRDAE RHCVACVDAS ERGLACPAFC GARARTVKKC VRDSSIE