Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2053 |
Symbol | gltJ2 |
ID | 3688300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2218439 |
End bp | 2219164 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637728509 |
Product | binding-protein-dependent transport system inner membrane component |
Protein accession | YP_333448 |
Protein GI | 76808662 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.210834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCCT GGCTCGCTCC CAAATATCTG ATGTGGTTAT GGCAGGGCTT CCTGCTGACG CTCGGCCTGT CGCTCGCGGC GGCCGTCACG GCGACGCTCG CGGGCTTCGC GCTCGCGATC GCCCGGCACG CGAAGCGCGC ATCGCCGCGG CGCGCGGCGG CCGCGTACGT CGTCGCATTT CGCAACACGC CGCTCGTCGT GCAGTTGCTG TTCTGGTATT TCGGCGTCGC CGCGCTGCTG CCCGAGCCGG CGATGGCGTG GCTCAACGCG CCTCATGCGC TCGACGTCGG CGGCCTCGCG CAGCGCTGGC CGTCGTTCGA GTTCGTCGCG GGCTGGCTCG GCCTGAGCGG CTACACGAGC GCGTTCGTCG CCGAGGAGTT TCAGGCGGGG CTGCGCGGCG TGCCGGCCGG CCAGCATCAC GCGGCGAGCG CGCTCGGCCT GTCGCCGCTG CAGGCGTTTC GCTTCGTCGT GCTGCCGCAG GCGGTGCGCA TCGCGCTGCC GCCGCTCTTC GGCCAGTACA TGAACCTGAT CAAGAACTCG TCGCTGACGA TGGCGATCGG CGTCGCCGAG CTGTCGTACG CATCGCGCCA AGTCGAGACC GAGACGTTCA GGACCTTCGC CGCATTCGGC GTGTCGACCG TGCTGTACGT CGCGGCGGTC GCGCTGGTCG AGGCGGCCGC GCAATGGACG CTGCGGCGGC GCGATCGCAC GTTCGCGGGG CGCTGA
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Protein sequence | MDAWLAPKYL MWLWQGFLLT LGLSLAAAVT ATLAGFALAI ARHAKRASPR RAAAAYVVAF RNTPLVVQLL FWYFGVAALL PEPAMAWLNA PHALDVGGLA QRWPSFEFVA GWLGLSGYTS AFVAEEFQAG LRGVPAGQHH AASALGLSPL QAFRFVVLPQ AVRIALPPLF GQYMNLIKNS SLTMAIGVAE LSYASRQVET ETFRTFAAFG VSTVLYVAAV ALVEAAAQWT LRRRDRTFAG R
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